Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 RPS2P4-201ENST00000476944 856 ntBASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF248Q8NDW4 AL158047.1-201ENST00000445918 881 ntBASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 AC097658.1-201ENST00000475555 843 ntBASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 AC142381.4-202ENST00000563973 229 ntBASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF248Q8NDW4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZNF248Q8NDW4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 BX276092.2-201ENST00000417668 665 ntBASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 AC006058.3-201ENST00000606217 1069 ntBASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF248Q8NDW4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 AL596275.1-201ENST00000423464 877 ntBASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 AC016405.3-201ENST00000607710 860 ntBASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 AC083880.1-201ENST00000608266 535 ntBASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF248Q8NDW4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 AC093787.1-201ENST00000450396 207 ntBASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 AC012676.1-201ENST00000574705 1949 ntBASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF248Q8NDW4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.14■□□□□ 0.81
ZNF248Q8NDW4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF248Q8NDW4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.14■□□□□ 0.81
ZNF248Q8NDW4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF248Q8NDW4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms