Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 SUDS3P1-201ENST00000505831 966 ntBASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF439Q8NDP4 AP006587.3-201ENST00000525742 1516 ntBASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 AC104564.3-201ENST00000582367 638 ntBASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF439Q8NDP4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 AC026310.3-201ENST00000625186 2373 ntBASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF439Q8NDP4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZNF439Q8NDP4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
ZNF439Q8NDP4 AC003102.1-202ENST00000563394 1796 ntBASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 MIR572-201ENST00000384983 95 ntBASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 AC105233.4-201ENST00000642045 216 ntBASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF439Q8NDP4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 Z98882.1-201ENST00000622160 2253 ntBASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF439Q8NDP4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms