Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 C9orf163-202ENST00000624034 2573 ntBASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PRPF38AQ8NAV1 KRT16P2-201ENST00000414673 1423 ntBASIC24.45■■□□□ 1.51
PRPF38AQ8NAV1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 AL138781.1-201ENST00000566567 1274 ntBASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PRPF38AQ8NAV1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRPF38AQ8NAV1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PRPF38AQ8NAV1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRPF38AQ8NAV1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 CYP2T1P-201ENST00000432607 1285 ntBASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 OR10C1-204ENST00000622521 1039 ntBASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 AC061975.6-201ENST00000579045 1553 ntBASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRPF38AQ8NAV1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 AC073210.2-201ENST00000430369 194 ntBASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.4■■□□□ 1.5
PRPF38AQ8NAV1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PRPF38AQ8NAV1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
PRPF38AQ8NAV1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PRPF38AQ8NAV1 RBM17P2-201ENST00000616397 1405 ntBASIC24.39■■□□□ 1.5
PRPF38AQ8NAV1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRPF38AQ8NAV1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRPF38AQ8NAV1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms