Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARHGEF39Q8N4T4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 AC016769.1-201ENST00000409132 1010 ntBASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 KRT18P11-201ENST00000435214 1283 ntBASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARHGEF39Q8N4T4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 MFSD11-216ENST00000590393 1141 ntBASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 RAP2CP1-201ENST00000605103 478 ntBASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 MYCNOS-205ENST00000641950 531 ntBASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARHGEF39Q8N4T4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ARHGEF39Q8N4T4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 AC061975.6-201ENST00000579045 1553 ntBASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ARHGEF39Q8N4T4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20■□□□□ 0.79
ARHGEF39Q8N4T4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 POU5F1P4-201ENST00000413175 1085 ntBASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 RARRES2P11-201ENST00000635158 484 ntBASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
ARHGEF39Q8N4T4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms