Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 KRT16P2-201ENST00000414673 1423 ntBASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.48■■□□□ 1.19
LIMS2Q7Z4I7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 AC090192.1-201ENST00000517740 490 ntBASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.47■■□□□ 1.19
LIMS2Q7Z4I7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.46■■□□□ 1.19
LIMS2Q7Z4I7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LIMS2Q7Z4I7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.19
LIMS2Q7Z4I7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 AC010536.3-201ENST00000620306 533 ntBASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.45■■□□□ 1.18
LIMS2Q7Z4I7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 CNN2P6-201ENST00000439038 900 ntBASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LIMS2Q7Z4I7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LIMS2Q7Z4I7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
LIMS2Q7Z4I7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms