Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 AC137767.1-201ENST00000602918 1920 ntBASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 AC009237.3-201ENST00000393279 1427 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DUX4L2-201ENST00000561772 1275 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 TERF1P2-201ENST00000583350 1212 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DUX4L6-201ENST00000626483 1275 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DUX4L1-201ENST00000627662 1275 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DUX4L8-201ENST00000629013 1275 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DUX4L3-201ENST00000630187 1275 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DUX4L7-201ENST00000630678 1275 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DUX4L5-201ENST00000630834 1275 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 LINC00526-201ENST00000581067 1875 ntBASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP1BQ7LBR1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CHMP1BQ7LBR1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 AL034346.1-201ENST00000568244 1277 ntBASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 NTF6G-201ENST00000591094 616 ntBASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 AL137060.1-201ENST00000618151 2648 ntBASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 RNF165-205ENST00000588679 2904 ntBASIC19.35■□□□□ 0.69
CHMP1BQ7LBR1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 TPRG1LP1-201ENST00000598702 760 ntBASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
CHMP1BQ7LBR1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP1BQ7LBR1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP1BQ7LBR1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP1BQ7LBR1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.33■□□□□ 0.69
CHMP1BQ7LBR1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP1BQ7LBR1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.33■□□□□ 0.69
CHMP1BQ7LBR1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP1BQ7LBR1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP1BQ7LBR1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP1BQ7LBR1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CHMP1BQ7LBR1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CHMP1BQ7LBR1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP1BQ7LBR1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CHMP1BQ7LBR1 AC127496.7-201ENST00000625110 1798 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms