Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTL4Q6ZR62 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTL4Q6ZR62 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL4Q6ZR62 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 AP004607.7-201ENST00000527152 1677 ntBASIC19.75■□□□□ 0.75
RTL4Q6ZR62 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 AC079140.4-201ENST00000507448 529 ntBASIC19.75■□□□□ 0.75
RTL4Q6ZR62 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL4Q6ZR62 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 AC022517.1-201ENST00000592429 346 ntBASIC19.74■□□□□ 0.75
RTL4Q6ZR62 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 FBXW4P1-201ENST00000426721 2239 ntBASIC19.74■□□□□ 0.75
RTL4Q6ZR62 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTL4Q6ZR62 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RTL4Q6ZR62 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL4Q6ZR62 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 AC007375.3-201ENST00000600936 2314 ntBASIC19.71■□□□□ 0.75
RTL4Q6ZR62 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL4Q6ZR62 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms