Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 AP003097.1-201ENST00000530657 1135 ntBASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 AC073648.6-201ENST00000641589 218 ntBASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 AC061975.6-201ENST00000579045 1553 ntBASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CNKSR3Q6P9H4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 UNC93B4-201ENST00000505679 747 ntBASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CNKSR3Q6P9H4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CNKSR3Q6P9H4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.93■■□□□ 1.26
CNKSR3Q6P9H4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.93■■□□□ 1.26
CNKSR3Q6P9H4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR3Q6P9H4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR3Q6P9H4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CNKSR3Q6P9H4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNKSR3Q6P9H4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.93■■□□□ 1.26
CNKSR3Q6P9H4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
CNKSR3Q6P9H4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 AC087742.1-201ENST00000575880 1738 ntBASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNKSR3Q6P9H4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNKSR3Q6P9H4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CNKSR3Q6P9H4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.89■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms