Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 RASA4CP-201ENST00000424092 1398 ntBASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 AC091305.1-201ENST00000479476 895 ntBASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 CA15P2-201ENST00000611168 834 ntBASIC18.27■□□□□ 0.52
ATPAF1Q5TC12 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.27■□□□□ 0.51
ATPAF1Q5TC12 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATPAF1Q5TC12 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATPAF1Q5TC12 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATPAF1Q5TC12 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 FEM1AP4-201ENST00000443167 1987 ntBASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 AC008764.7-201ENST00000593779 1081 ntBASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 AC087239.1-201ENST00000622671 572 ntBASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ATPAF1Q5TC12 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 AF213884.3-201ENST00000563833 479 ntBASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.25■□□□□ 0.51
ATPAF1Q5TC12 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 AC099791.1-201ENST00000416440 715 ntBASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATPAF1Q5TC12 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 AC010141.3-201ENST00000456659 717 ntBASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 AC142381.2-201ENST00000566120 298 ntBASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 AC126544.1-201ENST00000580842 1059 ntBASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.23■□□□□ 0.51
ATPAF1Q5TC12 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms