Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC003102.1-202ENST00000563394 1796 ntBASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LINC00242Q5T6M2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 AC010141.3-201ENST00000456659 717 ntBASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00242Q5T6M2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 GABARAPL3-202ENST00000624044 1851 ntBASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 AC239859.2-201ENST00000444165 318 ntBASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 OR2I1P-207ENST00000453522 948 ntBASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00242Q5T6M2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 MIR6724-1-201ENST00000616420 92 ntBASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 MIR6724-2-201ENST00000616483 92 ntBASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 MIR6724-4-201ENST00000617390 92 ntBASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 MIR6724-3-201ENST00000622482 92 ntBASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 AC006128.1-201ENST00000624704 1661 ntBASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00242Q5T6M2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 AP005212.1-201ENST00000581547 1997 ntBASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms