Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 IGHV3-19-201ENST00000521488 291 ntBASIC20.51■□□□□ 0.87
SGO1Q5FBB7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 AC106739.1-201ENST00000617035 715 ntBASIC20.51■□□□□ 0.87
SGO1Q5FBB7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SGO1Q5FBB7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 AC110285.6-201ENST00000617652 491 ntBASIC20.5■□□□□ 0.87
SGO1Q5FBB7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 TSPY26P-201ENST00000476365 1326 ntBASIC20.5■□□□□ 0.87
SGO1Q5FBB7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SGO1Q5FBB7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SGO1Q5FBB7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 AP006587.3-201ENST00000525742 1516 ntBASIC20.48■□□□□ 0.87
SGO1Q5FBB7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 AL024507.2-201ENST00000606070 2574 ntBASIC20.48■□□□□ 0.87
SGO1Q5FBB7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SGO1Q5FBB7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 AC027682.1-201ENST00000562846 899 ntBASIC20.47■□□□□ 0.87
SGO1Q5FBB7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SGO1Q5FBB7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 AP001330.3-201ENST00000520123 633 ntBASIC20.46■□□□□ 0.87
SGO1Q5FBB7 AF213884.3-201ENST00000563833 479 ntBASIC20.46■□□□□ 0.87
SGO1Q5FBB7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SGO1Q5FBB7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SGO1Q5FBB7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SGO1Q5FBB7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms