Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 DUN1YDL101C 1542 nt3.34□□□□□ -1.88
VTA1Q06263 RSF2YJR127C 4143 nt3.34□□□□□ -1.88
VTA1Q06263 YGL176CYGL176C 1665 nt3.33□□□□□ -1.88
VTA1Q06263 VPS17YOR132W 1656 nt3.33□□□□□ -1.88
VTA1Q06263 SMC3YJL074C 3693 nt3.33□□□□□ -1.88
VTA1Q06263 FAP7YDL166C 594 nt3.33□□□□□ -1.88
VTA1Q06263 ARF1YDL192W 546 nt3.33□□□□□ -1.88
VTA1Q06263 PSF1YDR013W 627 nt3.33□□□□□ -1.88
VTA1Q06263 HTB1YDR224C 396 nt3.33□□□□□ -1.88
VTA1Q06263 MFA1YDR461W 111 nt3.33□□□□□ -1.88
VTA1Q06263 CWC23YGL128C 852 nt3.33□□□□□ -1.88
VTA1Q06263 ENP2YGR145W 2124 nt3.33□□□□□ -1.88
VTA1Q06263 MTM1YGR257C 1101 nt3.33□□□□□ -1.88
VTA1Q06263 ERG2YMR202W 669 nt3.33□□□□□ -1.88
VTA1Q06263 TPM1YNL079C 600 nt3.33□□□□□ -1.88
VTA1Q06263 AUS1YOR011W 4185 nt3.33□□□□□ -1.88
VTA1Q06263 MRS2YOR334W 1413 nt3.33□□□□□ -1.88
VTA1Q06263 KAP95YLR347C 2586 nt3.33□□□□□ -1.88
VTA1Q06263 PWP2YCR057C 2772 nt3.33□□□□□ -1.88
VTA1Q06263 HRD1YOL013C 1656 nt3.33□□□□□ -1.88
VTA1Q06263 ZDS2YML109W 2829 nt3.32□□□□□ -1.88
VTA1Q06263 NKP1YDR383C 717 nt3.32□□□□□ -1.88
VTA1Q06263 USE1YGL098W 738 nt3.32□□□□□ -1.88
VTA1Q06263 RSM27YGR215W 333 nt3.32□□□□□ -1.88
VTA1Q06263 RNH203YLR154C 333 nt3.32□□□□□ -1.88
VTA1Q06263 IPP1YBR011C 864 nt3.32□□□□□ -1.88
VTA1Q06263 MCA1YOR197W 1299 nt3.32□□□□□ -1.88
VTA1Q06263 HUT1YPL244C 1020 nt3.32□□□□□ -1.88
VTA1Q06263 Q0255Q0255 1419 nt3.32□□□□□ -1.88
VTA1Q06263 YHR080CYHR080C 4038 nt3.31□□□□□ -1.88
VTA1Q06263 SKN7YHR206W 1869 nt3.31□□□□□ -1.88
VTA1Q06263 YNR063WYNR063W 1824 nt3.31□□□□□ -1.88
VTA1Q06263 NUP60YAR002W 1620 nt3.31□□□□□ -1.88
VTA1Q06263 TVP15YDR100W 432 nt3.31□□□□□ -1.88
VTA1Q06263 YDR320W-BYDR320W-B 138 nt3.31□□□□□ -1.88
VTA1Q06263 SEC4YFL005W 648 nt3.31□□□□□ -1.88
VTA1Q06263 YKL065W-AYKL065W-A 222 nt3.31□□□□□ -1.88
VTA1Q06263 YKL156C-AYKL156C-A 117 nt3.31□□□□□ -1.88
VTA1Q06263 YLR400WYLR400W 474 nt3.31□□□□□ -1.88
VTA1Q06263 TVP18YMR071C 504 nt3.31□□□□□ -1.88
VTA1Q06263 YMR122W-AYMR122W-A 255 nt3.31□□□□□ -1.88
VTA1Q06263 PEX11YOL147C 711 nt3.31□□□□□ -1.88
VTA1Q06263 SRL1YOR247W 633 nt3.31□□□□□ -1.88
VTA1Q06263 APD1YBR151W 951 nt3.31□□□□□ -1.88
VTA1Q06263 APC5YOR249C 2058 nt3.31□□□□□ -1.88
VTA1Q06263 MSR1YHR091C 1932 nt3.31□□□□□ -1.88
VTA1Q06263 YGR237CYGR237C 2358 nt3.3□□□□□ -1.88
VTA1Q06263 GCN1YGL195W 8019 nt3.3□□□□□ -1.88
VTA1Q06263 STE6YKL209C 3873 nt3.3□□□□□ -1.88
VTA1Q06263 tK(UUU)DtK(UUU)D 73 nt3.3□□□□□ -1.88
VTA1Q06263 tK(UUU)G1tK(UUU)G1 73 nt3.3□□□□□ -1.88
VTA1Q06263 tK(UUU)G2tK(UUU)G2 73 nt3.3□□□□□ -1.88
VTA1Q06263 tK(UUU)KtK(UUU)K 73 nt3.3□□□□□ -1.88
VTA1Q06263 tK(UUU)LtK(UUU)L 73 nt3.3□□□□□ -1.88
VTA1Q06263 tK(UUU)OtK(UUU)O 73 nt3.3□□□□□ -1.88
VTA1Q06263 tK(UUU)PtK(UUU)P 73 nt3.3□□□□□ -1.88
VTA1Q06263 COG7YGL005C 840 nt3.3□□□□□ -1.88
VTA1Q06263 YGR039WYGR039W 312 nt3.3□□□□□ -1.88
VTA1Q06263 COX3Q0275 810 nt3.3□□□□□ -1.88
VTA1Q06263 RAD33YML011C 534 nt3.3□□□□□ -1.88
VTA1Q06263 HUA2YOR284W 732 nt3.3□□□□□ -1.88
VTA1Q06263 YPR053CYPR053C 456 nt3.3□□□□□ -1.88
VTA1Q06263 UTP5YDR398W 1932 nt3.3□□□□□ -1.88
VTA1Q06263 ARG5,6YER069W 2592 nt3.3□□□□□ -1.88
VTA1Q06263 YMR018WYMR018W 1545 nt3.29□□□□□ -1.88
VTA1Q06263 SAG1YJR004C 1953 nt3.29□□□□□ -1.88
VTA1Q06263 CIN1YOR349W 3045 nt3.29□□□□□ -1.88
VTA1Q06263 PKH1YDR490C 2301 nt3.29□□□□□ -1.88
VTA1Q06263 YER039C-AYER039C-A 219 nt3.29□□□□□ -1.88
VTA1Q06263 THO1YER063W 657 nt3.29□□□□□ -1.88
VTA1Q06263 MAM1YER106W 909 nt3.29□□□□□ -1.88
VTA1Q06263 THP2YHR167W 786 nt3.29□□□□□ -1.88
VTA1Q06263 YNL276CYNL276C 396 nt3.29□□□□□ -1.88
VTA1Q06263 YOR238WYOR238W 912 nt3.29□□□□□ -1.88
VTA1Q06263 YPR027CYPR027C 834 nt3.29□□□□□ -1.88
VTA1Q06263 DPB3YBR278W 606 nt3.29□□□□□ -1.88
VTA1Q06263 GLC3YEL011W 2115 nt3.29□□□□□ -1.88
VTA1Q06263 IRC3YDR332W 2070 nt3.29□□□□□ -1.88
VTA1Q06263 BEM4YPL161C 1902 nt3.29□□□□□ -1.88
VTA1Q06263 YDR090CYDR090C 933 nt3.28□□□□□ -1.88
VTA1Q06263 YGR073CYGR073C 372 nt3.28□□□□□ -1.88
VTA1Q06263 CTK2YJL006C 972 nt3.28□□□□□ -1.88
VTA1Q06263 YAL064W-BYAL064W-B 381 nt3.28□□□□□ -1.88
VTA1Q06263 YBL068W-AYBL068W-A 237 nt3.28□□□□□ -1.88
VTA1Q06263 VAM10YOR068C 345 nt3.28□□□□□ -1.88
VTA1Q06263 TUM1YOR251C 915 nt3.28□□□□□ -1.88
VTA1Q06263 ETP1YHL010C 1758 nt3.28□□□□□ -1.89
VTA1Q06263 EXO5YBR163W 1758 nt3.28□□□□□ -1.89
VTA1Q06263 SEC15YGL233W 2733 nt3.28□□□□□ -1.89
VTA1Q06263 YJL049WYJL049W 1353 nt3.27□□□□□ -1.89
VTA1Q06263 PIG2YIL045W 1617 nt3.27□□□□□ -1.89
VTA1Q06263 ATP16YDL004W 483 nt3.27□□□□□ -1.89
VTA1Q06263 ERP3YDL018C 678 nt3.27□□□□□ -1.89
VTA1Q06263 IKI1YHR187W 930 nt3.27□□□□□ -1.89
VTA1Q06263 SMD2YLR275W 333 nt3.27□□□□□ -1.89
VTA1Q06263 RPS30AYLR287C-A 192 nt3.27□□□□□ -1.89
VTA1Q06263 RPN13YLR421C 471 nt3.27□□□□□ -1.89
VTA1Q06263 RPL13BYMR142C 600 nt3.27□□□□□ -1.89
VTA1Q06263 YBR090CYBR090C 369 nt3.27□□□□□ -1.89
VTA1Q06263 SET1YHR119W 3243 nt3.27□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 44.4 ms