Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN12P56749 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
CLDN12P56749 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLDN12P56749 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLDN12P56749 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN12P56749 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN12P56749 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN12P56749 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN12P56749 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLDN12P56749 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN12P56749 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN12P56749 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN12P56749 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN12P56749 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN12P56749 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CLDN12P56749 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN12P56749 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN12P56749 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN12P56749 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN12P56749 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN12P56749 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN12P56749 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CLDN12P56749 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN12P56749 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CLDN12P56749 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN12P56749 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN12P56749 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN12P56749 AC006455.2-201ENST00000429931 906 ntBASIC18.33■□□□□ 0.52
CLDN12P56749 TSPY9P-201ENST00000440215 945 ntBASIC18.33■□□□□ 0.52
CLDN12P56749 TSPY11P-201ENST00000442607 1045 ntBASIC18.33■□□□□ 0.52
CLDN12P56749 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN12P56749 MIR4787-201ENST00000607364 84 ntBASIC18.33■□□□□ 0.52
CLDN12P56749 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN12P56749 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLDN12P56749 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN12P56749 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN12P56749 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN12P56749 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN12P56749 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN12P56749 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLDN12P56749 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.32■□□□□ 0.52
CLDN12P56749 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN12P56749 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN12P56749 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN12P56749 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN12P56749 pRNA.6-201ENST00000610482 90 ntBASIC18.32■□□□□ 0.52
CLDN12P56749 pRNA.5-201ENST00000612139 90 ntBASIC18.32■□□□□ 0.52
CLDN12P56749 pRNA.11-201ENST00000618423 90 ntBASIC18.32■□□□□ 0.52
CLDN12P56749 pRNA.13-201ENST00000619112 90 ntBASIC18.32■□□□□ 0.52
CLDN12P56749 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN12P56749 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN12P56749 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN12P56749 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN12P56749 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN12P56749 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN12P56749 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN12P56749 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLDN12P56749 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CLDN12P56749 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN12P56749 Z92544.1-202ENST00000571933 1220 ntBASIC18.31■□□□□ 0.52
CLDN12P56749 AL117332.1-201ENST00000622628 974 ntBASIC18.31■□□□□ 0.52
CLDN12P56749 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN12P56749 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN12P56749 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN12P56749 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CLDN12P56749 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN12P56749 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN12P56749 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLDN12P56749 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN12P56749 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN12P56749 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN12P56749 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms