Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 STP1YDR463W 1560 nt5.04□□□□□ -1.6
UFD2P54860 YPR148CYPR148C 1308 nt5.04□□□□□ -1.6
UFD2P54860 SRS2YJL092W 3525 nt5.04□□□□□ -1.6
UFD2P54860 YMR221CYMR221C 1515 nt5.04□□□□□ -1.6
UFD2P54860 STB2YMR053C 2553 nt5.04□□□□□ -1.6
UFD2P54860 TDA2YER071C 381 nt5.04□□□□□ -1.6
UFD2P54860 RGI2YIL057C 495 nt5.04□□□□□ -1.6
UFD2P54860 ACF4YJR083C 930 nt5.04□□□□□ -1.6
UFD2P54860 YKT6YKL196C 603 nt5.04□□□□□ -1.6
UFD2P54860 YBL010CYBL010C 843 nt5.04□□□□□ -1.6
UFD2P54860 ASI2YNL159C 870 nt5.04□□□□□ -1.6
UFD2P54860 CDC21YOR074C 915 nt5.04□□□□□ -1.6
UFD2P54860 SVS1YPL163C 783 nt5.04□□□□□ -1.6
UFD2P54860 YBR242WYBR242W 717 nt5.04□□□□□ -1.6
UFD2P54860 GPX2YBR244W 489 nt5.04□□□□□ -1.6
UFD2P54860 RNT1YMR239C 1416 nt5.04□□□□□ -1.6
UFD2P54860 YOR022CYOR022C 2148 nt5.03□□□□□ -1.6
UFD2P54860 RPN6YDL097C 1305 nt5.03□□□□□ -1.6
UFD2P54860 TPO5YKL174C 1857 nt5.03□□□□□ -1.6
UFD2P54860 SYF1YDR416W 2580 nt5.03□□□□□ -1.6
UFD2P54860 HLJ1YMR161W 675 nt5.03□□□□□ -1.6
UFD2P54860 NGL1YOL042W 1092 nt5.03□□□□□ -1.6
UFD2P54860 YGK3YOL128C 1128 nt5.03□□□□□ -1.6
UFD2P54860 YOL159CYOL159C 516 nt5.03□□□□□ -1.6
UFD2P54860 YER158CYER158C 1722 nt5.03□□□□□ -1.6
UFD2P54860 FOX2YKR009C 2703 nt5.03□□□□□ -1.6
UFD2P54860 FAD1YDL045C 921 nt5.02□□□□□ -1.61
UFD2P54860 RSM24YDR175C 960 nt5.02□□□□□ -1.61
UFD2P54860 RIP1YEL024W 648 nt5.02□□□□□ -1.61
UFD2P54860 PMI40YER003C 1290 nt5.02□□□□□ -1.61
UFD2P54860 BNA6YFR047C 888 nt5.02□□□□□ -1.61
UFD2P54860 ECL1YGR146C 636 nt5.02□□□□□ -1.61
UFD2P54860 YIL115W-AYIL115W-A 372 nt5.02□□□□□ -1.61
UFD2P54860 YML031C-AYML031C-A 336 nt5.02□□□□□ -1.61
UFD2P54860 DDR48YMR173W 1293 nt5.02□□□□□ -1.61
UFD2P54860 PAI3YMR174C 207 nt5.02□□□□□ -1.61
UFD2P54860 YNL150WYNL150W 408 nt5.02□□□□□ -1.61
UFD2P54860 YNL181WYNL181W 1224 nt5.02□□□□□ -1.61
UFD2P54860 DIB1YPR082C 432 nt5.02□□□□□ -1.61
UFD2P54860 YSY6YBR162W-A 198 nt5.02□□□□□ -1.61
UFD2P54860 YCL022CYCL022C 516 nt5.02□□□□□ -1.61
UFD2P54860 VPS27YNR006W 1869 nt5.02□□□□□ -1.61
UFD2P54860 RIM4YHL024W 2142 nt5.02□□□□□ -1.61
UFD2P54860 HRK1YOR267C 2280 nt5.02□□□□□ -1.61
UFD2P54860 MSE1YOL033W 1611 nt5.01□□□□□ -1.61
UFD2P54860 YND1YER005W 1893 nt5.01□□□□□ -1.61
UFD2P54860 CAX4YGR036C 720 nt5.01□□□□□ -1.61
UFD2P54860 PXR1YGR280C 816 nt5.01□□□□□ -1.61
UFD2P54860 SAE3YHR079C-A 276 nt5.01□□□□□ -1.61
UFD2P54860 YHR125WYHR125W 306 nt5.01□□□□□ -1.61
UFD2P54860 SDP1YIL113W 630 nt5.01□□□□□ -1.61
UFD2P54860 PSE1YMR308C 3270 nt5.01□□□□□ -1.61
UFD2P54860 PUT2YHR037W 1728 nt5□□□□□ -1.61
UFD2P54860 GAL80YML051W 1308 nt5□□□□□ -1.61
UFD2P54860 SEC9YGR009C 1956 nt5□□□□□ -1.61
UFD2P54860 PES4YFR023W 1836 nt5□□□□□ -1.61
UFD2P54860 YER006C-AYER006C-A 318 nt5□□□□□ -1.61
UFD2P54860 NTF2YER009W 378 nt5□□□□□ -1.61
UFD2P54860 CSE4YKL049C 690 nt5□□□□□ -1.61
UFD2P54860 YPL035CYPL035C 348 nt5□□□□□ -1.61
UFD2P54860 YPR050CYPR050C 414 nt5□□□□□ -1.61
UFD2P54860 AEP1YMR064W 1557 nt4.99□□□□□ -1.61
UFD2P54860 PHM7YOL084W 2976 nt4.99□□□□□ -1.61
UFD2P54860 GDH2YDL215C 3279 nt4.99□□□□□ -1.61
UFD2P54860 ECT1YGR007W 972 nt4.99□□□□□ -1.61
UFD2P54860 EPT1YHR123W 1176 nt4.99□□□□□ -1.61
UFD2P54860 NKP2YLR315W 462 nt4.99□□□□□ -1.61
UFD2P54860 BET5YML077W 480 nt4.99□□□□□ -1.61
UFD2P54860 YMR193C-AYMR193C-A 387 nt4.99□□□□□ -1.61
UFD2P54860 RPL19AYBR084C-A 570 nt4.99□□□□□ -1.61
UFD2P54860 MNN4YKL201C 3537 nt4.99□□□□□ -1.61
UFD2P54860 PKP2YGL059W 1476 nt4.99□□□□□ -1.61
UFD2P54860 FRT2YAL028W 1587 nt4.99□□□□□ -1.61
UFD2P54860 LST4YKL176C 2487 nt4.99□□□□□ -1.61
UFD2P54860 FAR8YMR029C 1572 nt4.99□□□□□ -1.61
UFD2P54860 FZO1YBR179C 2568 nt4.99□□□□□ -1.61
UFD2P54860 APC1YNL172W 5247 nt4.98□□□□□ -1.61
UFD2P54860 YDR115WYDR115W 318 nt4.98□□□□□ -1.61
UFD2P54860 YFL015CYFL015C 495 nt4.98□□□□□ -1.61
UFD2P54860 YIL175WYIL175W 318 nt4.98□□□□□ -1.61
UFD2P54860 CNB1YKL190W 528 nt4.98□□□□□ -1.61
UFD2P54860 YAL068W-AYAL068W-A 255 nt4.98□□□□□ -1.61
UFD2P54860 YLR287CYLR287C 1068 nt4.98□□□□□ -1.61
UFD2P54860 FBP1YLR377C 1047 nt4.98□□□□□ -1.61
UFD2P54860 OPY2YPR075C 1083 nt4.98□□□□□ -1.61
UFD2P54860 DER1YBR201W 636 nt4.98□□□□□ -1.61
UFD2P54860 SHG1YBR258C 429 nt4.98□□□□□ -1.61
UFD2P54860 MUD2YKL074C 1584 nt4.98□□□□□ -1.61
UFD2P54860 PHO84YML123C 1764 nt4.98□□□□□ -1.61
UFD2P54860 YDR261C-DYDR261C-D 4815 nt4.98□□□□□ -1.61
UFD2P54860 VHC1YBR235W 3363 nt4.98□□□□□ -1.61
UFD2P54860 TEL1YBL088C 8364 nt4.98□□□□□ -1.61
UFD2P54860 AVT1YJR001W 1809 nt4.97□□□□□ -1.61
UFD2P54860 FLO8YER109C 2400 nt4.97□□□□□ -1.61
UFD2P54860 JHD2YJR119C 2187 nt4.97□□□□□ -1.61
UFD2P54860 MFA1YDR461W 111 nt4.97□□□□□ -1.61
UFD2P54860 YAP3YHL009C 993 nt4.97□□□□□ -1.61
UFD2P54860 YIR020CYIR020C 303 nt4.97□□□□□ -1.61
UFD2P54860 PEP8YJL053W 1140 nt4.97□□□□□ -1.61
UFD2P54860 MCR1YKL150W 909 nt4.97□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms