Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC25A1P53007 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 AC009237.3-201ENST00000393279 1427 ntBASIC18.79■□□□□ 0.6
SLC25A1P53007 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC25A1P53007 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC25A1P53007 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A1P53007 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC25A1P53007 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A1P53007 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC25A1P53007 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC25A1P53007 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC25A1P53007 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A1P53007 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A1P53007 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A1P53007 AC126544.1-201ENST00000580842 1059 ntBASIC18.78■□□□□ 0.6
SLC25A1P53007 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC25A1P53007 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A1P53007 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A1P53007 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC25A1P53007 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC25A1P53007 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A1P53007 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLC25A1P53007 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SLC25A1P53007 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLC25A1P53007 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC25A1P53007 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC25A1P53007 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC25A1P53007 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC25A1P53007 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC25A1P53007 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC25A1P53007 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.77■□□□□ 0.6
SLC25A1P53007 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC25A1P53007 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC25A1P53007 AC024257.2-201ENST00000549699 147 ntBASIC18.77■□□□□ 0.6
SLC25A1P53007 AL136162.1-201ENST00000607711 1078 ntBASIC18.77■□□□□ 0.6
SLC25A1P53007 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SLC25A1P53007 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLC25A1P53007 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SLC25A1P53007 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC25A1P53007 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC25A1P53007 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC25A1P53007 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC25A1P53007 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLC25A1P53007 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC25A1P53007 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC25A1P53007 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC25A1P53007 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC25A1P53007 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 LINC01521-201ENST00000504184 1943 ntBASIC18.76■□□□□ 0.59
SLC25A1P53007 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC25A1P53007 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC25A1P53007 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SLC25A1P53007 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC25A1P53007 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC25A1P53007 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC25A1P53007 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A1P53007 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC25A1P53007 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC25A1P53007 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
SLC25A1P53007 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.75■□□□□ 0.59
SLC25A1P53007 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC25A1P53007 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC25A1P53007 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC25A1P53007 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A1P53007 AC135279.3-201ENST00000610945 1311 ntBASIC18.74■□□□□ 0.59
SLC25A1P53007 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC25A1P53007 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC25A1P53007 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC25A1P53007 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC25A1P53007 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC25A1P53007 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SLC25A1P53007 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC25A1P53007 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC25A1P53007 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC25A1P53007 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.73■□□□□ 0.59
SLC25A1P53007 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC25A1P53007 AC055733.4-201ENST00000638462 1354 ntBASIC18.73■□□□□ 0.59
SLC25A1P53007 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC25A1P53007 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms