Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPT1AP50416 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CPT1AP50416 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPT1AP50416 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPT1AP50416 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CPT1AP50416 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CPT1AP50416 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.57■■□□□ 1.36
CPT1AP50416 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.57■■□□□ 1.36
CPT1AP50416 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPT1AP50416 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CPT1AP50416 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
CPT1AP50416 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPT1AP50416 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CPT1AP50416 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.56■■□□□ 1.36
CPT1AP50416 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.56■■□□□ 1.36
CPT1AP50416 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.56■■□□□ 1.36
CPT1AP50416 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPT1AP50416 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CPT1AP50416 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPT1AP50416 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPT1AP50416 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.56■■□□□ 1.36
CPT1AP50416 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.56■■□□□ 1.36
CPT1AP50416 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.56■■□□□ 1.36
CPT1AP50416 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CPT1AP50416 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CPT1AP50416 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
CPT1AP50416 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPT1AP50416 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CPT1AP50416 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
CPT1AP50416 AC003102.1-202ENST00000563394 1796 ntBASIC23.55■■□□□ 1.36
CPT1AP50416 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPT1AP50416 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
CPT1AP50416 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.55■■□□□ 1.36
CPT1AP50416 AC091874.3-201ENST00000512672 1195 ntBASIC23.55■■□□□ 1.36
CPT1AP50416 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.55■■□□□ 1.36
CPT1AP50416 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPT1AP50416 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPT1AP50416 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.55■■□□□ 1.36
CPT1AP50416 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPT1AP50416 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CPT1AP50416 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPT1AP50416 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPT1AP50416 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.55■■□□□ 1.36
CPT1AP50416 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.54■■□□□ 1.36
CPT1AP50416 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPT1AP50416 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPT1AP50416 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.54■■□□□ 1.36
CPT1AP50416 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CPT1AP50416 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPT1AP50416 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
CPT1AP50416 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.53■■□□□ 1.36
CPT1AP50416 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CPT1AP50416 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CPT1AP50416 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.53■■□□□ 1.36
CPT1AP50416 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.53■■□□□ 1.36
CPT1AP50416 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CPT1AP50416 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.53■■□□□ 1.36
CPT1AP50416 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
CPT1AP50416 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CPT1AP50416 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPT1AP50416 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.53■■□□□ 1.36
CPT1AP50416 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CPT1AP50416 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
CPT1AP50416 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPT1AP50416 DUSP5P2-201ENST00000426873 1033 ntBASIC23.52■■□□□ 1.36
CPT1AP50416 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.52■■□□□ 1.36
CPT1AP50416 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.52■■□□□ 1.36
CPT1AP50416 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CPT1AP50416 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.52■■□□□ 1.36
CPT1AP50416 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPT1AP50416 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPT1AP50416 AC093323.1-202ENST00000635031 2045 ntBASIC23.52■■□□□ 1.36
CPT1AP50416 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPT1AP50416 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPT1AP50416 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPT1AP50416 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.51■■□□□ 1.35
CPT1AP50416 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPT1AP50416 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.51■■□□□ 1.35
CPT1AP50416 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.51■■□□□ 1.35
CPT1AP50416 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPT1AP50416 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPT1AP50416 PRORSD1P-201ENST00000295112 541 ntBASIC23.51■■□□□ 1.35
CPT1AP50416 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPT1AP50416 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CPT1AP50416 AC093827.2-201ENST00000512654 315 ntBASIC23.51■■□□□ 1.35
CPT1AP50416 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.51■■□□□ 1.35
CPT1AP50416 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.51■■□□□ 1.35
CPT1AP50416 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.51■■□□□ 1.35
CPT1AP50416 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CPT1AP50416 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CPT1AP50416 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPT1AP50416 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.51■■□□□ 1.35
CPT1AP50416 AC092053.2-201ENST00000640557 1818 ntBASIC23.5■■□□□ 1.35
CPT1AP50416 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.5■■□□□ 1.35
CPT1AP50416 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPT1AP50416 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPT1AP50416 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPT1AP50416 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.5■■□□□ 1.35
CPT1AP50416 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPT1AP50416 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms