Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 CDC40YDR364C 1368 nt2.48□□□□□ -2.01
LSM4P40070 MPS2YGL075C 1164 nt2.47□□□□□ -2.01
LSM4P40070 SAY1YGR263C 1275 nt2.47□□□□□ -2.01
LSM4P40070 YHL045WYHL045W 348 nt2.47□□□□□ -2.01
LSM4P40070 REC102YLR329W 795 nt2.47□□□□□ -2.01
LSM4P40070 YNL234WYNL234W 1281 nt2.47□□□□□ -2.01
LSM4P40070 SWC4YGR002C 1431 nt2.47□□□□□ -2.01
LSM4P40070 PBI1YPL272C 1554 nt2.47□□□□□ -2.01
LSM4P40070 PIN4YBL051C 2007 nt2.47□□□□□ -2.01
LSM4P40070 RPN3YER021W 1572 nt2.46□□□□□ -2.02
LSM4P40070 YCL076WYCL076W 744 nt2.46□□□□□ -2.02
LSM4P40070 AIM11YER093C-A 414 nt2.46□□□□□ -2.02
LSM4P40070 PEX14YGL153W 1026 nt2.46□□□□□ -2.02
LSM4P40070 YGR204C-AYGR204C-A 114 nt2.46□□□□□ -2.02
LSM4P40070 YLR365WYLR365W 333 nt2.46□□□□□ -2.02
LSM4P40070 BLS1YLR408C 369 nt2.46□□□□□ -2.02
LSM4P40070 YOR020W-AYOR020W-A 273 nt2.46□□□□□ -2.02
LSM4P40070 SPS4YOR313C 1017 nt2.46□□□□□ -2.02
LSM4P40070 YBR116CYBR116C 528 nt2.46□□□□□ -2.02
LSM4P40070 ARO4YBR249C 1113 nt2.46□□□□□ -2.02
LSM4P40070 STE24YJR117W 1362 nt2.46□□□□□ -2.02
LSM4P40070 TOR1YJR066W 7413 nt2.45□□□□□ -2.02
LSM4P40070 HMS1YOR032C 1305 nt2.45□□□□□ -2.02
LSM4P40070 MMS1YPR164W 4224 nt2.45□□□□□ -2.02
LSM4P40070 RRT13YER066W 558 nt2.45□□□□□ -2.02
LSM4P40070 YGR219WYGR219W 342 nt2.45□□□□□ -2.02
LSM4P40070 DOG1YHR044C 741 nt2.45□□□□□ -2.02
LSM4P40070 EMC2YJR088C 879 nt2.45□□□□□ -2.02
LSM4P40070 ATP11YNL315C 957 nt2.45□□□□□ -2.02
LSM4P40070 CYR1YJL005W 6081 nt2.45□□□□□ -2.02
LSM4P40070 YCG1YDR325W 3108 nt2.45□□□□□ -2.02
LSM4P40070 MNT3YIL014W 1893 nt2.45□□□□□ -2.02
LSM4P40070 ITT1YML068W 1395 nt2.45□□□□□ -2.02
LSM4P40070 MED1YPR070W 1701 nt2.45□□□□□ -2.02
LSM4P40070 ACA1YER045C 1470 nt2.45□□□□□ -2.02
LSM4P40070 NUM1YDR150W 8247 nt2.45□□□□□ -2.02
LSM4P40070 SRP68YPL243W 1800 nt2.45□□□□□ -2.02
LSM4P40070 TLC1TLC1 1301 nt2.44□□□□□ -2.02
LSM4P40070 YBL005W-BYBL005W-B 5268 nt2.44□□□□□ -2.02
LSM4P40070 TPO5YKL174C 1857 nt2.44□□□□□ -2.02
LSM4P40070 snR63snR63 255 nt2.44□□□□□ -2.02
LSM4P40070 FIN1YDR130C 876 nt2.44□□□□□ -2.02
LSM4P40070 HYP2YEL034W 474 nt2.44□□□□□ -2.02
LSM4P40070 YHR052W-AYHR052W-A 195 nt2.44□□□□□ -2.02
LSM4P40070 YHR054W-AYHR054W-A 195 nt2.44□□□□□ -2.02
LSM4P40070 tW(CCA)G1tW(CCA)G1 72 nt2.44□□□□□ -2.02
LSM4P40070 tW(CCA)G2tW(CCA)G2 72 nt2.44□□□□□ -2.02
LSM4P40070 tW(CCA)JtW(CCA)J 72 nt2.44□□□□□ -2.02
LSM4P40070 tW(CCA)KtW(CCA)K 72 nt2.44□□□□□ -2.02
LSM4P40070 tW(CCA)MtW(CCA)M 72 nt2.44□□□□□ -2.02
LSM4P40070 tW(CCA)PtW(CCA)P 72 nt2.44□□□□□ -2.02
LSM4P40070 SAW1YAL027W 786 nt2.44□□□□□ -2.02
LSM4P40070 PAU23YLR037C 375 nt2.44□□□□□ -2.02
LSM4P40070 HRT3YLR097C 1035 nt2.44□□□□□ -2.02
LSM4P40070 PSK1YAL017W 4071 nt2.43□□□□□ -2.02
LSM4P40070 RPS22AYJL190C 393 nt2.43□□□□□ -2.02
LSM4P40070 YJR020WYJR020W 333 nt2.43□□□□□ -2.02
LSM4P40070 RSM26YJR101W 801 nt2.43□□□□□ -2.02
LSM4P40070 YKL156C-AYKL156C-A 117 nt2.43□□□□□ -2.02
LSM4P40070 YLR257WYLR257W 966 nt2.43□□□□□ -2.02
LSM4P40070 NIT3YLR351C 876 nt2.43□□□□□ -2.02
LSM4P40070 YMR194C-AYMR194C-A 225 nt2.43□□□□□ -2.02
LSM4P40070 YMR310CYMR310C 954 nt2.43□□□□□ -2.02
LSM4P40070 SYC1YOR179C 567 nt2.43□□□□□ -2.02
LSM4P40070 YOR385WYOR385W 873 nt2.43□□□□□ -2.02
LSM4P40070 YSA1YBR111C 696 nt2.43□□□□□ -2.02
LSM4P40070 ICR1ICR1 3199 nt2.43□□□□□ -2.02
LSM4P40070 ORC1YML065W 2745 nt2.43□□□□□ -2.02
LSM4P40070 DSE4YNR067C 3354 nt2.43□□□□□ -2.02
LSM4P40070 YKR015CYKR015C 1707 nt2.42□□□□□ -2.02
LSM4P40070 YKL222CYKL222C 2118 nt2.42□□□□□ -2.02
LSM4P40070 PSY2YNL201C 2577 nt2.42□□□□□ -2.02
LSM4P40070 MSS2YDL107W 1056 nt2.42□□□□□ -2.02
LSM4P40070 YDR355CYDR355C 303 nt2.42□□□□□ -2.02
LSM4P40070 SEM1YDR363W-A 270 nt2.42□□□□□ -2.02
LSM4P40070 YGR039WYGR039W 312 nt2.42□□□□□ -2.02
LSM4P40070 MRPL6YHR147C 645 nt2.42□□□□□ -2.02
LSM4P40070 YAP5YIR018W 738 nt2.42□□□□□ -2.02
LSM4P40070 PIR1YKL164C 1026 nt2.42□□□□□ -2.02
LSM4P40070 OMA1YKR087C 1038 nt2.42□□□□□ -2.02
LSM4P40070 INP1YMR204C 1263 nt2.42□□□□□ -2.02
LSM4P40070 snR11snR11 258 nt2.42□□□□□ -2.02
LSM4P40070 CAF20YOR276W 486 nt2.42□□□□□ -2.02
LSM4P40070 GPI2YPL076W 843 nt2.42□□□□□ -2.02
LSM4P40070 SOK1YDR006C 2706 nt2.42□□□□□ -2.02
LSM4P40070 NMD2YHR077C 3270 nt2.42□□□□□ -2.02
LSM4P40070 YKR078WYKR078W 1758 nt2.41□□□□□ -2.02
LSM4P40070 YOR365CYOR365C 2112 nt2.41□□□□□ -2.02
LSM4P40070 VPS64YDR200C 1815 nt2.41□□□□□ -2.02
LSM4P40070 YDL026WYDL026W 312 nt2.41□□□□□ -2.02
LSM4P40070 YGR149WYGR149W 1299 nt2.41□□□□□ -2.02
LSM4P40070 RAD10YML095C 633 nt2.41□□□□□ -2.02
LSM4P40070 ATG3YNR007C 933 nt2.41□□□□□ -2.02
LSM4P40070 MPP6YNR024W 561 nt2.41□□□□□ -2.02
LSM4P40070 MPD2YOL088C 834 nt2.41□□□□□ -2.02
LSM4P40070 YOR263CYOR263C 408 nt2.41□□□□□ -2.02
LSM4P40070 SUR1YPL057C 1149 nt2.41□□□□□ -2.02
LSM4P40070 GYL1YMR192W 2163 nt2.41□□□□□ -2.02
LSM4P40070 MSS4YDR208W 2340 nt2.41□□□□□ -2.02
LSM4P40070 PST1YDR055W 1335 nt2.41□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 66.3 ms