Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.28■■□□□ 1.8
KCNA3P22001 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KCNA3P22001 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.28■■□□□ 1.8
KCNA3P22001 AC233263.1-201ENST00000578059 224 ntBASIC26.28■■□□□ 1.8
KCNA3P22001 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNA3P22001 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KCNA3P22001 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
KCNA3P22001 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNA3P22001 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.28■■□□□ 1.8
KCNA3P22001 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.27■■□□□ 1.8
KCNA3P22001 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.27■■□□□ 1.8
KCNA3P22001 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
KCNA3P22001 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KCNA3P22001 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.27■■□□□ 1.8
KCNA3P22001 KRT18P21-201ENST00000515767 1272 ntBASIC26.27■■□□□ 1.8
KCNA3P22001 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.27■■□□□ 1.8
KCNA3P22001 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.27■■□□□ 1.8
KCNA3P22001 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.27■■□□□ 1.8
KCNA3P22001 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KCNA3P22001 KRT16P2-201ENST00000414673 1423 ntBASIC26.27■■□□□ 1.8
KCNA3P22001 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.27■■□□□ 1.8
KCNA3P22001 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
KCNA3P22001 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNA3P22001 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KCNA3P22001 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
KCNA3P22001 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNA3P22001 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
KCNA3P22001 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.26■■□□□ 1.79
KCNA3P22001 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
KCNA3P22001 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNA3P22001 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNA3P22001 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNA3P22001 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNA3P22001 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
KCNA3P22001 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KCNA3P22001 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.25■■□□□ 1.79
KCNA3P22001 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNA3P22001 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.25■■□□□ 1.79
KCNA3P22001 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.25■■□□□ 1.79
KCNA3P22001 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.24■■□□□ 1.79
KCNA3P22001 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
KCNA3P22001 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNA3P22001 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.24■■□□□ 1.79
KCNA3P22001 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
KCNA3P22001 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.24■■□□□ 1.79
KCNA3P22001 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
KCNA3P22001 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNA3P22001 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KCNA3P22001 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNA3P22001 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.23■■□□□ 1.79
KCNA3P22001 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.23■■□□□ 1.79
KCNA3P22001 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.23■■□□□ 1.79
KCNA3P22001 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.23■■□□□ 1.79
KCNA3P22001 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNA3P22001 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KCNA3P22001 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNA3P22001 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
KCNA3P22001 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
KCNA3P22001 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
KCNA3P22001 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.22■■□□□ 1.79
KCNA3P22001 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNA3P22001 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
KCNA3P22001 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNA3P22001 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNA3P22001 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
KCNA3P22001 BX088651.1-201ENST00000540551 451 ntBASIC26.22■■□□□ 1.79
KCNA3P22001 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
KCNA3P22001 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
KCNA3P22001 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.22■■□□□ 1.79
KCNA3P22001 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.22■■□□□ 1.79
KCNA3P22001 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
KCNA3P22001 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
KCNA3P22001 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.22■■□□□ 1.79
KCNA3P22001 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNA3P22001 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
KCNA3P22001 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.21■■□□□ 1.79
KCNA3P22001 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KCNA3P22001 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KCNA3P22001 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.21■■□□□ 1.79
KCNA3P22001 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.21■■□□□ 1.79
KCNA3P22001 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.21■■□□□ 1.79
KCNA3P22001 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.21■■□□□ 1.79
KCNA3P22001 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.21■■□□□ 1.79
KCNA3P22001 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.21■■□□□ 1.79
KCNA3P22001 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.21■■□□□ 1.79
KCNA3P22001 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KCNA3P22001 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.2■■□□□ 1.79
KCNA3P22001 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
KCNA3P22001 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
KCNA3P22001 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
KCNA3P22001 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
KCNA3P22001 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms