Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC2P18074 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.79■■□□□ 1.08
ERCC2P18074 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC2P18074 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC2P18074 CLDN5-201ENST00000403084 2357 ntBASIC21.79■■□□□ 1.08
ERCC2P18074 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC2P18074 KRT18P14-201ENST00000534205 1250 ntBASIC21.79■■□□□ 1.08
ERCC2P18074 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ERCC2P18074 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC2P18074 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC2P18074 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.79■■□□□ 1.08
ERCC2P18074 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC2P18074 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.78■■□□□ 1.08
ERCC2P18074 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC2P18074 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.78■■□□□ 1.08
ERCC2P18074 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ERCC2P18074 EEF1DP3-203ENST00000566025 782 ntBASIC21.78■■□□□ 1.08
ERCC2P18074 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.78■■□□□ 1.08
ERCC2P18074 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC2P18074 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ERCC2P18074 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC2P18074 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ERCC2P18074 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC2P18074 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.77■■□□□ 1.08
ERCC2P18074 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.77■■□□□ 1.08
ERCC2P18074 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.77■■□□□ 1.08
ERCC2P18074 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
ERCC2P18074 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
ERCC2P18074 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC2P18074 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
ERCC2P18074 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.77■■□□□ 1.08
ERCC2P18074 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC2P18074 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC2P18074 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ERCC2P18074 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ERCC2P18074 KRT87P-202ENST00000534226 1464 ntBASIC21.77■■□□□ 1.07
ERCC2P18074 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
ERCC2P18074 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC2P18074 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.76■■□□□ 1.07
ERCC2P18074 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.76■■□□□ 1.07
ERCC2P18074 AC097381.1-201ENST00000429019 1296 ntBASIC21.76■■□□□ 1.07
ERCC2P18074 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC2P18074 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.76■■□□□ 1.07
ERCC2P18074 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC2P18074 AC053503.5-201ENST00000601508 636 ntBASIC21.76■■□□□ 1.07
ERCC2P18074 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.76■■□□□ 1.07
ERCC2P18074 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.76■■□□□ 1.07
ERCC2P18074 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.76■■□□□ 1.07
ERCC2P18074 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.76■■□□□ 1.07
ERCC2P18074 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.76■■□□□ 1.07
ERCC2P18074 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC2P18074 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC2P18074 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ERCC2P18074 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
ERCC2P18074 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.75■■□□□ 1.07
ERCC2P18074 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.75■■□□□ 1.07
ERCC2P18074 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.75■■□□□ 1.07
ERCC2P18074 MIR6821-201ENST00000617625 74 ntBASIC21.75■■□□□ 1.07
ERCC2P18074 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.75■■□□□ 1.07
ERCC2P18074 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ERCC2P18074 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.74■■□□□ 1.07
ERCC2P18074 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC2P18074 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC2P18074 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
ERCC2P18074 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.74■■□□□ 1.07
ERCC2P18074 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC2P18074 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC2P18074 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.74■■□□□ 1.07
ERCC2P18074 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC2P18074 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.74■■□□□ 1.07
ERCC2P18074 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ERCC2P18074 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ERCC2P18074 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.73■■□□□ 1.07
ERCC2P18074 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC2P18074 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC2P18074 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC2P18074 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ERCC2P18074 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ERCC2P18074 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.73■■□□□ 1.07
ERCC2P18074 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.73■■□□□ 1.07
ERCC2P18074 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.73■■□□□ 1.07
ERCC2P18074 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.73■■□□□ 1.07
ERCC2P18074 DUX4L2-201ENST00000561772 1275 ntBASIC21.73■■□□□ 1.07
ERCC2P18074 AC087623.3-201ENST00000607047 1098 ntBASIC21.73■■□□□ 1.07
ERCC2P18074 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
ERCC2P18074 DUX4L6-201ENST00000626483 1275 ntBASIC21.73■■□□□ 1.07
ERCC2P18074 DUX4L1-201ENST00000627662 1275 ntBASIC21.73■■□□□ 1.07
ERCC2P18074 DUX4L8-201ENST00000629013 1275 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms