Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 AC005229.4-201ENST00000610085 2198 ntBASIC22.97■■□□□ 1.27
TRIM49CP0CI26 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 YBX1P1-201ENST00000445822 960 ntBASIC22.97■■□□□ 1.27
TRIM49CP0CI26 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 LINC02228-203ENST00000641970 1355 ntBASIC22.97■■□□□ 1.27
TRIM49CP0CI26 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM49CP0CI26 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TRIM49CP0CI26 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 FEM1AP4-201ENST00000443167 1987 ntBASIC22.95■■□□□ 1.26
TRIM49CP0CI26 AC079140.4-201ENST00000507448 529 ntBASIC22.95■■□□□ 1.26
TRIM49CP0CI26 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 AL024507.2-201ENST00000606070 2574 ntBASIC22.95■■□□□ 1.26
TRIM49CP0CI26 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.95■■□□□ 1.26
TRIM49CP0CI26 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM49CP0CI26 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 AC123595.1-201ENST00000440769 1046 ntBASIC22.93■■□□□ 1.26
TRIM49CP0CI26 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 CCDC92B-201ENST00000575506 885 ntBASIC22.93■■□□□ 1.26
TRIM49CP0CI26 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM49CP0CI26 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 TERF1P2-201ENST00000583350 1212 ntBASIC22.92■■□□□ 1.26
TRIM49CP0CI26 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM49CP0CI26 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 EEF1DP3-203ENST00000566025 782 ntBASIC22.91■■□□□ 1.26
TRIM49CP0CI26 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM49CP0CI26 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms