Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL4A1P02462 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
COL4A1P02462 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
COL4A1P02462 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.13■■□□□ 1.77
COL4A1P02462 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.13■■□□□ 1.77
COL4A1P02462 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.13■■□□□ 1.77
COL4A1P02462 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL4A1P02462 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.13■■□□□ 1.77
COL4A1P02462 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.13■■□□□ 1.77
COL4A1P02462 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL4A1P02462 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A1P02462 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A1P02462 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.12■■□□□ 1.77
COL4A1P02462 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A1P02462 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.12■■□□□ 1.77
COL4A1P02462 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A1P02462 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A1P02462 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A1P02462 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A1P02462 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.12■■□□□ 1.77
COL4A1P02462 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.12■■□□□ 1.77
COL4A1P02462 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL4A1P02462 POU5F1P3-201ENST00000428824 1078 ntBASIC26.12■■□□□ 1.77
COL4A1P02462 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.12■■□□□ 1.77
COL4A1P02462 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.12■■□□□ 1.77
COL4A1P02462 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
COL4A1P02462 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.11■■□□□ 1.77
COL4A1P02462 AC010980.2-201ENST00000587099 1412 ntBASIC26.11■■□□□ 1.77
COL4A1P02462 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A1P02462 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.11■■□□□ 1.77
COL4A1P02462 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.11■■□□□ 1.77
COL4A1P02462 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.11■■□□□ 1.77
COL4A1P02462 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A1P02462 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.11■■□□□ 1.77
COL4A1P02462 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL4A1P02462 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.1■■□□□ 1.77
COL4A1P02462 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 PRORSD1P-201ENST00000295112 541 ntBASIC26.1■■□□□ 1.77
COL4A1P02462 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.1■■□□□ 1.77
COL4A1P02462 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.1■■□□□ 1.77
COL4A1P02462 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
COL4A1P02462 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.1■■□□□ 1.77
COL4A1P02462 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.1■■□□□ 1.77
COL4A1P02462 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL4A1P02462 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.09■■□□□ 1.77
COL4A1P02462 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
COL4A1P02462 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL4A1P02462 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.09■■□□□ 1.77
COL4A1P02462 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
COL4A1P02462 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL4A1P02462 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.09■■□□□ 1.77
COL4A1P02462 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.09■■□□□ 1.77
COL4A1P02462 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.09■■□□□ 1.77
COL4A1P02462 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL4A1P02462 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.09■■□□□ 1.77
COL4A1P02462 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL4A1P02462 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL4A1P02462 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.09■■□□□ 1.77
COL4A1P02462 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL4A1P02462 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.09■■□□□ 1.77
COL4A1P02462 DUSP5P2-201ENST00000426873 1033 ntBASIC26.09■■□□□ 1.77
COL4A1P02462 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL4A1P02462 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL4A1P02462 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL4A1P02462 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL4A1P02462 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL4A1P02462 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL4A1P02462 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL4A1P02462 AL512625.2-201ENST00000417533 625 ntBASIC26.08■■□□□ 1.77
COL4A1P02462 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.08■■□□□ 1.77
COL4A1P02462 RPS2P52-201ENST00000469610 820 ntBASIC26.08■■□□□ 1.77
COL4A1P02462 MIR4758-201ENST00000577688 71 ntBASIC26.08■■□□□ 1.77
COL4A1P02462 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
COL4A1P02462 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
COL4A1P02462 AC010542.4-201ENST00000563151 1910 ntBASIC26.08■■□□□ 1.76
COL4A1P02462 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL4A1P02462 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.07■■□□□ 1.76
COL4A1P02462 AC008175.2-201ENST00000612840 297 ntBASIC26.07■■□□□ 1.76
COL4A1P02462 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.07■■□□□ 1.76
COL4A1P02462 ITM2C-210ENST00000620962 501 ntBASIC26.07■■□□□ 1.76
COL4A1P02462 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.07■■□□□ 1.76
COL4A1P02462 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
COL4A1P02462 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL4A1P02462 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
COL4A1P02462 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.07■■□□□ 1.76
COL4A1P02462 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.07■■□□□ 1.76
COL4A1P02462 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.07■■□□□ 1.76
COL4A1P02462 AC127496.7-201ENST00000625110 1798 ntBASIC26.06■■□□□ 1.76
COL4A1P02462 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.06■■□□□ 1.76
COL4A1P02462 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.06■■□□□ 1.76
COL4A1P02462 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.06■■□□□ 1.76
COL4A1P02462 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms