Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AL162412.1-201ENST00000567129 965 ntBASIC23.69■■□□□ 1.38
PGK1P00558 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PGK1P00558 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.68■■□□□ 1.38
PGK1P00558 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PGK1P00558 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.68■■□□□ 1.38
PGK1P00558 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.68■■□□□ 1.38
PGK1P00558 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PGK1P00558 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PGK1P00558 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.67■■□□□ 1.38
PGK1P00558 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.67■■□□□ 1.38
PGK1P00558 AC061975.6-201ENST00000579045 1553 ntBASIC23.67■■□□□ 1.38
PGK1P00558 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PGK1P00558 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PGK1P00558 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PGK1P00558 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.67■■□□□ 1.38
PGK1P00558 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.67■■□□□ 1.38
PGK1P00558 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.67■■□□□ 1.38
PGK1P00558 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.67■■□□□ 1.38
PGK1P00558 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.67■■□□□ 1.38
PGK1P00558 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.67■■□□□ 1.38
PGK1P00558 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.67■■□□□ 1.38
PGK1P00558 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PGK1P00558 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PGK1P00558 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PGK1P00558 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PGK1P00558 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.67■■□□□ 1.38
PGK1P00558 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PGK1P00558 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PGK1P00558 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.66■■□□□ 1.38
PGK1P00558 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.66■■□□□ 1.38
PGK1P00558 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PGK1P00558 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PGK1P00558 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PGK1P00558 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.65■■□□□ 1.38
PGK1P00558 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.65■■□□□ 1.38
PGK1P00558 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.65■■□□□ 1.38
PGK1P00558 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PGK1P00558 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PGK1P00558 AC087742.1-201ENST00000575880 1738 ntBASIC23.65■■□□□ 1.38
PGK1P00558 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.65■■□□□ 1.38
PGK1P00558 RPS2P4-201ENST00000476944 856 ntBASIC23.65■■□□□ 1.38
PGK1P00558 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PGK1P00558 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.65■■□□□ 1.38
PGK1P00558 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.65■■□□□ 1.38
PGK1P00558 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.65■■□□□ 1.38
PGK1P00558 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.65■■□□□ 1.38
PGK1P00558 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.65■■□□□ 1.38
PGK1P00558 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.65■■□□□ 1.38
PGK1P00558 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PGK1P00558 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PGK1P00558 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.65■■□□□ 1.38
PGK1P00558 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PGK1P00558 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PGK1P00558 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
PGK1P00558 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.64■■□□□ 1.37
PGK1P00558 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.64■■□□□ 1.37
PGK1P00558 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PGK1P00558 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PGK1P00558 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.64■■□□□ 1.37
PGK1P00558 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PGK1P00558 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.64■■□□□ 1.37
PGK1P00558 AC026366.1-201ENST00000488803 879 ntBASIC23.64■■□□□ 1.37
PGK1P00558 UNC93B5-201ENST00000530315 699 ntBASIC23.64■■□□□ 1.37
PGK1P00558 AC243732.1-201ENST00000612648 864 ntBASIC23.64■■□□□ 1.37
PGK1P00558 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PGK1P00558 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PGK1P00558 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PGK1P00558 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PGK1P00558 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PGK1P00558 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.63■■□□□ 1.37
PGK1P00558 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.63■■□□□ 1.37
PGK1P00558 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.63■■□□□ 1.37
PGK1P00558 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.63■■□□□ 1.37
PGK1P00558 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.63■■□□□ 1.37
PGK1P00558 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PGK1P00558 AC073648.6-201ENST00000641589 218 ntBASIC23.63■■□□□ 1.37
PGK1P00558 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PGK1P00558 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PGK1P00558 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.62■■□□□ 1.37
PGK1P00558 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PGK1P00558 LSM12P1-201ENST00000411836 588 ntBASIC23.62■■□□□ 1.37
PGK1P00558 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
PGK1P00558 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms