Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ALDH1A1P00352 KRT18P21-201ENST00000515767 1272 ntBASIC24.44■■□□□ 1.5
ALDH1A1P00352 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC24.44■■□□□ 1.5
ALDH1A1P00352 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
ALDH1A1P00352 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
ALDH1A1P00352 KRT17P1-201ENST00000399211 1546 ntBASIC24.44■■□□□ 1.5
ALDH1A1P00352 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
ALDH1A1P00352 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ALDH1A1P00352 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ALDH1A1P00352 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ALDH1A1P00352 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ALDH1A1P00352 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 PNMA6B-201ENST00000538162 1200 ntBASIC24.43■■□□□ 1.5
ALDH1A1P00352 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.43■■□□□ 1.5
ALDH1A1P00352 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ALDH1A1P00352 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ALDH1A1P00352 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.42■■□□□ 1.5
ALDH1A1P00352 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
ALDH1A1P00352 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ALDH1A1P00352 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ALDH1A1P00352 BX088651.1-201ENST00000540551 451 ntBASIC24.42■■□□□ 1.5
ALDH1A1P00352 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ALDH1A1P00352 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ALDH1A1P00352 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.41■■□□□ 1.5
ALDH1A1P00352 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
ALDH1A1P00352 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ALDH1A1P00352 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.41■■□□□ 1.5
ALDH1A1P00352 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.41■■□□□ 1.5
ALDH1A1P00352 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ALDH1A1P00352 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ALDH1A1P00352 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
ALDH1A1P00352 LINC00526-201ENST00000581067 1875 ntBASIC24.41■■□□□ 1.5
ALDH1A1P00352 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ALDH1A1P00352 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.4■■□□□ 1.5
ALDH1A1P00352 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
ALDH1A1P00352 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC24.4■■□□□ 1.5
ALDH1A1P00352 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.4■■□□□ 1.5
ALDH1A1P00352 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.4■■□□□ 1.5
ALDH1A1P00352 FAM21FP-204ENST00000608637 956 ntBASIC24.4■■□□□ 1.5
ALDH1A1P00352 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
ALDH1A1P00352 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ALDH1A1P00352 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ALDH1A1P00352 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ALDH1A1P00352 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ALDH1A1P00352 KRT17P2-201ENST00000300992 1314 ntBASIC24.39■■□□□ 1.5
ALDH1A1P00352 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.39■■□□□ 1.5
ALDH1A1P00352 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ALDH1A1P00352 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
ALDH1A1P00352 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ALDH1A1P00352 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24.39■■□□□ 1.49
ALDH1A1P00352 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
ALDH1A1P00352 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
ALDH1A1P00352 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ALDH1A1P00352 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ALDH1A1P00352 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ALDH1A1P00352 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.39■■□□□ 1.49
ALDH1A1P00352 AC004812.2-201ENST00000611079 2094 ntBASIC24.39■■□□□ 1.49
ALDH1A1P00352 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ALDH1A1P00352 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
ALDH1A1P00352 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC24.38■■□□□ 1.49
ALDH1A1P00352 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.38■■□□□ 1.49
ALDH1A1P00352 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
ALDH1A1P00352 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
ALDH1A1P00352 AL355472.2-201ENST00000422958 438 ntBASIC24.38■■□□□ 1.49
ALDH1A1P00352 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ALDH1A1P00352 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ALDH1A1P00352 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
ALDH1A1P00352 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC24.38■■□□□ 1.49
ALDH1A1P00352 AL589743.5-201ENST00000616611 1050 ntBASIC24.38■■□□□ 1.49
ALDH1A1P00352 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ALDH1A1P00352 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ALDH1A1P00352 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.38■■□□□ 1.49
ALDH1A1P00352 AC092368.3-202ENST00000574180 1591 ntBASIC24.37■■□□□ 1.49
ALDH1A1P00352 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.37■■□□□ 1.49
ALDH1A1P00352 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
ALDH1A1P00352 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ALDH1A1P00352 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ALDH1A1P00352 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ALDH1A1P00352 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
ALDH1A1P00352 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ALDH1A1P00352 AC012618.2-201ENST00000428058 849 ntBASIC24.37■■□□□ 1.49
ALDH1A1P00352 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.37■■□□□ 1.49
ALDH1A1P00352 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ALDH1A1P00352 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ALDH1A1P00352 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.37■■□□□ 1.49
ALDH1A1P00352 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ALDH1A1P00352 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ALDH1A1P00352 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ALDH1A1P00352 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ALDH1A1P00352 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
ALDH1A1P00352 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms