Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTN3O95197 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTN3O95197 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTN3O95197 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTN3O95197 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.28■■□□□ 1.16
RTN3O95197 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTN3O95197 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.28■■□□□ 1.16
RTN3O95197 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.28■■□□□ 1.16
RTN3O95197 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.28■■□□□ 1.16
RTN3O95197 AC242852.2-201ENST00000615738 1807 ntBASIC22.28■■□□□ 1.16
RTN3O95197 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTN3O95197 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTN3O95197 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTN3O95197 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTN3O95197 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTN3O95197 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTN3O95197 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.27■■□□□ 1.16
RTN3O95197 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RTN3O95197 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTN3O95197 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RTN3O95197 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.27■■□□□ 1.16
RTN3O95197 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.27■■□□□ 1.16
RTN3O95197 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RTN3O95197 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
RTN3O95197 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.27■■□□□ 1.16
RTN3O95197 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
RTN3O95197 AC073111.5-205ENST00000641717 521 ntBASIC22.27■■□□□ 1.16
RTN3O95197 MYCNOS-205ENST00000641950 531 ntBASIC22.27■■□□□ 1.16
RTN3O95197 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTN3O95197 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
RTN3O95197 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.26■■□□□ 1.15
RTN3O95197 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RTN3O95197 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.26■■□□□ 1.15
RTN3O95197 AC003102.1-202ENST00000563394 1796 ntBASIC22.26■■□□□ 1.15
RTN3O95197 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.26■■□□□ 1.15
RTN3O95197 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.26■■□□□ 1.15
RTN3O95197 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.26■■□□□ 1.15
RTN3O95197 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.26■■□□□ 1.15
RTN3O95197 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.26■■□□□ 1.15
RTN3O95197 MFSD11-216ENST00000590393 1141 ntBASIC22.26■■□□□ 1.15
RTN3O95197 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.26■■□□□ 1.15
RTN3O95197 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RTN3O95197 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.26■■□□□ 1.15
RTN3O95197 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTN3O95197 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RTN3O95197 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.25■■□□□ 1.15
RTN3O95197 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTN3O95197 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTN3O95197 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTN3O95197 CDCA4P2-201ENST00000441182 718 ntBASIC22.25■■□□□ 1.15
RTN3O95197 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RTN3O95197 AC008175.2-201ENST00000612840 297 ntBASIC22.25■■□□□ 1.15
RTN3O95197 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTN3O95197 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTN3O95197 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTN3O95197 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTN3O95197 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RTN3O95197 AC233723.2-201ENST00000623798 2106 ntBASIC22.24■■□□□ 1.15
RTN3O95197 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTN3O95197 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTN3O95197 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.24■■□□□ 1.15
RTN3O95197 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTN3O95197 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTN3O95197 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.24■■□□□ 1.15
RTN3O95197 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.24■■□□□ 1.15
RTN3O95197 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.24■■□□□ 1.15
RTN3O95197 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.24■■□□□ 1.15
RTN3O95197 RAP2CP1-201ENST00000605103 478 ntBASIC22.24■■□□□ 1.15
RTN3O95197 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTN3O95197 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTN3O95197 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTN3O95197 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTN3O95197 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RTN3O95197 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTN3O95197 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.23■■□□□ 1.15
RTN3O95197 POU5F1P4-201ENST00000413175 1085 ntBASIC22.23■■□□□ 1.15
RTN3O95197 AC026185.1-201ENST00000445748 174 ntBASIC22.23■■□□□ 1.15
RTN3O95197 SLC7A5P1-201ENST00000568957 537 ntBASIC22.23■■□□□ 1.15
RTN3O95197 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTN3O95197 AC120498.10-201ENST00000621827 505 ntBASIC22.23■■□□□ 1.15
RTN3O95197 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTN3O95197 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTN3O95197 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTN3O95197 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTN3O95197 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTN3O95197 RNF165-205ENST00000588679 2904 ntBASIC22.23■■□□□ 1.15
RTN3O95197 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.22■■□□□ 1.15
RTN3O95197 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTN3O95197 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.22■■□□□ 1.15
RTN3O95197 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTN3O95197 GUSBP5-202ENST00000510805 1989 ntBASIC22.22■■□□□ 1.15
RTN3O95197 FAM99A-202ENST00000538190 1989 ntBASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms