Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHD2O14647 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC29.89■■■□□ 2.38
CHD2O14647 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
CHD2O14647 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
CHD2O14647 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC29.89■■■□□ 2.38
CHD2O14647 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CHD2O14647 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHD2O14647 AC233263.1-201ENST00000578059 224 ntBASIC29.88■■■□□ 2.37
CHD2O14647 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC29.88■■■□□ 2.37
CHD2O14647 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC29.87■■■□□ 2.37
CHD2O14647 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD2O14647 MIR1224-201ENST00000408193 85 ntBASIC29.87■■■□□ 2.37
CHD2O14647 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD2O14647 NME6-213ENST00000451657 871 ntTSL 2 BASIC29.87■■■□□ 2.37
CHD2O14647 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHD2O14647 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC29.87■■■□□ 2.37
CHD2O14647 MAX-217ENST00000557277 728 ntTSL 3 BASIC29.87■■■□□ 2.37
CHD2O14647 LINC01023-201ENST00000606054 436 ntBASIC29.87■■■□□ 2.37
CHD2O14647 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHD2O14647 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC29.87■■■□□ 2.37
CHD2O14647 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC29.87■■■□□ 2.37
CHD2O14647 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC29.87■■■□□ 2.37
CHD2O14647 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC29.87■■■□□ 2.37
CHD2O14647 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHD2O14647 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHD2O14647 MDFI-202ENST00000373050 809 ntTSL 2 BASIC29.86■■■□□ 2.37
CHD2O14647 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
CHD2O14647 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHD2O14647 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHD2O14647 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC29.86■■■□□ 2.37
CHD2O14647 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHD2O14647 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD2O14647 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD2O14647 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC29.85■■■□□ 2.37
CHD2O14647 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC29.85■■■□□ 2.37
CHD2O14647 AC010331.1-201ENST00000611423 582 ntBASIC29.85■■■□□ 2.37
CHD2O14647 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD2O14647 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CHD2O14647 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
CHD2O14647 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
CHD2O14647 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD2O14647 LSM12P1-201ENST00000411836 588 ntBASIC29.85■■■□□ 2.37
CHD2O14647 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC29.85■■■□□ 2.37
CHD2O14647 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CHD2O14647 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CHD2O14647 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC29.84■■■□□ 2.37
CHD2O14647 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD2O14647 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD2O14647 FAM210CP-201ENST00000445714 574 ntBASIC29.84■■■□□ 2.37
CHD2O14647 SNORA78-201ENST00000459373 127 ntBASIC29.84■■■□□ 2.37
CHD2O14647 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD2O14647 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC29.84■■■□□ 2.37
CHD2O14647 KLF2-202ENST00000592003 564 ntTSL 3 BASIC29.84■■■□□ 2.37
CHD2O14647 CYP2T3P-201ENST00000601990 817 ntBASIC29.84■■■□□ 2.37
CHD2O14647 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHD2O14647 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
CHD2O14647 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHD2O14647 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC29.83■■■□□ 2.37
CHD2O14647 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.82■■■□□ 2.37
CHD2O14647 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD2O14647 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD2O14647 AC012618.2-201ENST00000428058 849 ntBASIC29.82■■■□□ 2.36
CHD2O14647 HLA-B-256ENST00000639848 1089 ntBASIC29.82■■■□□ 2.36
CHD2O14647 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CHD2O14647 AC020928.2-201ENST00000588717 2197 ntBASIC29.82■■■□□ 2.36
CHD2O14647 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC29.82■■■□□ 2.36
CHD2O14647 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC29.82■■■□□ 2.36
CHD2O14647 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD2O14647 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD2O14647 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC29.82■■■□□ 2.36
CHD2O14647 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD2O14647 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD2O14647 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC29.81■■■□□ 2.36
CHD2O14647 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
CHD2O14647 AC061975.6-201ENST00000579045 1553 ntBASIC29.81■■■□□ 2.36
CHD2O14647 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
CHD2O14647 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CHD2O14647 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHD2O14647 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC29.8■■■□□ 2.36
CHD2O14647 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHD2O14647 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHD2O14647 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC29.8■■■□□ 2.36
CHD2O14647 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC29.8■■■□□ 2.36
CHD2O14647 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
CHD2O14647 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHD2O14647 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC29.8■■■□□ 2.36
CHD2O14647 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC29.8■■■□□ 2.36
CHD2O14647 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC29.8■■■□□ 2.36
CHD2O14647 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC29.79■■■□□ 2.36
CHD2O14647 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHD2O14647 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC29.79■■■□□ 2.36
CHD2O14647 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC29.79■■■□□ 2.36
CHD2O14647 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHD2O14647 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CHD2O14647 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC29.79■■■□□ 2.36
CHD2O14647 Z99916.2-201ENST00000604037 246 ntBASIC29.79■■■□□ 2.36
CHD2O14647 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC29.79■■■□□ 2.36
CHD2O14647 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CHD2O14647 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CHD2O14647 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms