Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CROCCP5-201ENST00000436658 830 ntBASIC21.24■□□□□ 0.99
TRIM38O00635 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM38O00635 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM38O00635 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM38O00635 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM38O00635 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRIM38O00635 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM38O00635 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TRIM38O00635 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM38O00635 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.23■□□□□ 0.99
TRIM38O00635 AC079140.4-201ENST00000507448 529 ntBASIC21.23■□□□□ 0.99
TRIM38O00635 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM38O00635 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM38O00635 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM38O00635 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 AC104771.1-201ENST00000603335 964 ntBASIC21.23■□□□□ 0.99
TRIM38O00635 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRIM38O00635 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM38O00635 AC080038.3-201ENST00000623346 1952 ntBASIC21.23■□□□□ 0.99
TRIM38O00635 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM38O00635 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM38O00635 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM38O00635 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM38O00635 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM38O00635 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM38O00635 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM38O00635 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM38O00635 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM38O00635 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM38O00635 AC011767.1-201ENST00000617410 1153 ntBASIC21.22■□□□□ 0.99
TRIM38O00635 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM38O00635 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM38O00635 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM38O00635 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM38O00635 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM38O00635 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM38O00635 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM38O00635 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
TRIM38O00635 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TRIM38O00635 AC006970.2-201ENST00000450065 779 ntBASIC21.21■□□□□ 0.99
TRIM38O00635 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.21■□□□□ 0.99
TRIM38O00635 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM38O00635 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM38O00635 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM38O00635 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
TRIM38O00635 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM38O00635 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM38O00635 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM38O00635 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM38O00635 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM38O00635 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM38O00635 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TRIM38O00635 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM38O00635 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM38O00635 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM38O00635 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM38O00635 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM38O00635 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM38O00635 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM38O00635 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM38O00635 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM38O00635 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM38O00635 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM38O00635 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM38O00635 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM38O00635 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRIM38O00635 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.19■□□□□ 0.98
TRIM38O00635 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM38O00635 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.19■□□□□ 0.98
TRIM38O00635 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM38O00635 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM38O00635 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM38O00635 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM38O00635 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM38O00635 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM38O00635 KRT18P11-201ENST00000435214 1283 ntBASIC21.18■□□□□ 0.98
TRIM38O00635 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM38O00635 AL109923.1-201ENST00000618799 583 ntBASIC21.18■□□□□ 0.98
TRIM38O00635 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM38O00635 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM38O00635 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM38O00635 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM38O00635 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms