Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC231657.2-201ENST00000624556 255 ntBASIC21.06■□□□□ 0.96
H3BM21 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
H3BM21 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
H3BM21 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H3BM21 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.05■□□□□ 0.96
H3BM21 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H3BM21 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
H3BM21 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.05■□□□□ 0.96
H3BM21 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H3BM21 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H3BM21 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.05■□□□□ 0.96
H3BM21 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.05■□□□□ 0.96
H3BM21 AC104771.1-201ENST00000603335 964 ntBASIC21.05■□□□□ 0.96
H3BM21 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
H3BM21 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.05■□□□□ 0.96
H3BM21 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.05■□□□□ 0.96
H3BM21 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H3BM21 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 EP400NL-214ENST00000641289 2402 ntBASIC21.04■□□□□ 0.96
H3BM21 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.04■□□□□ 0.96
H3BM21 MYCNOS-205ENST00000641950 531 ntBASIC21.04■□□□□ 0.96
H3BM21 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.04■□□□□ 0.96
H3BM21 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.04■□□□□ 0.96
H3BM21 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
H3BM21 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H3BM21 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3BM21 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3BM21 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.03■□□□□ 0.96
H3BM21 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.03■□□□□ 0.96
H3BM21 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
H3BM21 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
H3BM21 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
H3BM21 NCF1B-203ENST00000435988 1254 ntBASIC21.03■□□□□ 0.96
H3BM21 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.03■□□□□ 0.96
H3BM21 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.03■□□□□ 0.96
H3BM21 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.03■□□□□ 0.96
H3BM21 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.03■□□□□ 0.96
H3BM21 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.03■□□□□ 0.96
H3BM21 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.03■□□□□ 0.96
H3BM21 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
H3BM21 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.03■□□□□ 0.96
H3BM21 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
H3BM21 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3BM21 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3BM21 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
H3BM21 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3BM21 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.02■□□□□ 0.96
H3BM21 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
H3BM21 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3BM21 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
H3BM21 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
H3BM21 GPX1P1-201ENST00000388829 606 ntBASIC21.02■□□□□ 0.96
H3BM21 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
H3BM21 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
H3BM21 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3BM21 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
H3BM21 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
H3BM21 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H3BM21 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.02■□□□□ 0.95
H3BM21 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H3BM21 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H3BM21 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H3BM21 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.01■□□□□ 0.95
H3BM21 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.01■□□□□ 0.95
H3BM21 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H3BM21 AL355802.2-201ENST00000402069 882 ntBASIC21.01■□□□□ 0.95
H3BM21 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.01■□□□□ 0.95
H3BM21 AC007322.1-201ENST00000426983 750 ntBASIC21.01■□□□□ 0.95
H3BM21 AC010141.2-201ENST00000452426 721 ntBASIC21.01■□□□□ 0.95
H3BM21 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.01■□□□□ 0.95
H3BM21 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.01■□□□□ 0.95
H3BM21 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.01■□□□□ 0.95
H3BM21 KRT18P20-201ENST00000548986 1279 ntBASIC21.01■□□□□ 0.95
H3BM21 AC138907.5-202ENST00000569484 235 ntBASIC21.01■□□□□ 0.95
H3BM21 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.01■□□□□ 0.95
H3BM21 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.01■□□□□ 0.95
H3BM21 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
H3BM21 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H3BM21 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.01■□□□□ 0.95
H3BM21 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H3BM21 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H3BM21 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H3BM21 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21■□□□□ 0.95
H3BM21 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21■□□□□ 0.95
H3BM21 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms