Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 SOX15-203ENST00000570788 1093 ntBASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 AL590326.2-201ENST00000625139 305 ntBASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.98■■□□□ 1.59
TMEM88BA6NKF7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 KRT16P2-201ENST00000414673 1423 ntBASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 C2orf69P4-201ENST00000565394 541 ntBASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.97■■□□□ 1.59
TMEM88BA6NKF7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.96■■□□□ 1.59
TMEM88BA6NKF7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.95■■□□□ 1.59
TMEM88BA6NKF7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.95■■□□□ 1.58
TMEM88BA6NKF7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.95■■□□□ 1.58
TMEM88BA6NKF7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TMEM88BA6NKF7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.95■■□□□ 1.58
TMEM88BA6NKF7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TMEM88BA6NKF7 AL034346.1-201ENST00000568244 1277 ntBASIC24.95■■□□□ 1.58
TMEM88BA6NKF7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.95■■□□□ 1.58
TMEM88BA6NKF7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.95■■□□□ 1.58
TMEM88BA6NKF7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 AL049597.2-201ENST00000565575 961 ntBASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
TMEM88BA6NKF7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 POM121L13P-201ENST00000422362 380 ntBASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMEM88BA6NKF7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 PRKY-204ENST00000533551 1019 ntBASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 AC022211.4-201ENST00000625094 2161 ntBASIC24.92■■□□□ 1.58
TMEM88BA6NKF7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 AP006587.3-201ENST00000525742 1516 ntBASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 AL355075.4-201ENST00000554988 638 ntBASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 AC100791.3-201ENST00000617619 330 ntBASIC24.91■■□□□ 1.58
TMEM88BA6NKF7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms