Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC092437.1-201ENST00000624794 1048 ntBASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC244015.2-201ENST00000616358 1861 ntBASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC079140.4-201ENST00000507448 529 ntBASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 KRT18P61-201ENST00000585825 1298 ntBASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AL137784.2-201ENST00000607332 1000 ntBASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 KRT87P-202ENST00000534226 1464 ntBASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF12-TNFSF13A0A0A6YY99 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12-TNFSF13A0A0A6YY99 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms