Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 AL358852.1-201ENST00000623174 1268 ntBASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV26-1A0A087WT03 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 AC012414.1-201ENST00000556676 535 ntBASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 AL354811.1-201ENST00000610286 706 ntBASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV26-1A0A087WT03 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 MIR6084-201ENST00000622012 110 ntBASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 GUSBP5-202ENST00000510805 1989 ntBASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 AC139530.1-201ENST00000575312 1977 ntBASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV26-1A0A087WT03 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 AC080038.3-201ENST00000623346 1952 ntBASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 SMUG1P1-201ENST00000590640 811 ntBASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 ECEL1P1-201ENST00000373592 1742 ntBASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV26-1A0A087WT03 LINC00526-201ENST00000581067 1875 ntBASIC15.16■□□□□ 0.02
TRAV26-1A0A087WT03 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms