Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV30A0A087WSZ9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 AC073130.3-201ENST00000624389 2278 ntBASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 AC026471.6-201ENST00000622954 1905 ntBASIC16.57■□□□□ 0.24
TRAV30A0A087WSZ9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV30A0A087WSZ9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV30A0A087WSZ9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 AC233992.3-201ENST00000607491 485 ntBASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV30A0A087WSZ9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 UNC93B3-201ENST00000308076 687 ntBASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV30A0A087WSZ9 FEM1AP4-201ENST00000443167 1987 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms