Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV9-1A0A075B6T8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 AC098818.2-201ENST00000564925 2320 ntBASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-1A0A075B6T8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TRAV9-1A0A075B6T8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 AC020907.5-201ENST00000624372 1936 ntBASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV9-1A0A075B6T8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV9-1A0A075B6T8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 AC004448.1-201ENST00000458332 883 ntBASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV9-1A0A075B6T8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms