Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 AC003102.1-202ENST00000563394 1796 ntBASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 CROCCP5-201ENST00000436658 830 ntBASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 SLC7A5P2-201ENST00000553010 536 ntBASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 DUX4L16-201ENST00000555130 1264 ntBASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 AC008175.2-201ENST00000612840 297 ntBASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 MIR663A-201ENST00000385250 93 ntBASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 HLA-L-209ENST00000420110 1011 ntBASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 AC120498.10-201ENST00000621827 505 ntBASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 AC231657.2-201ENST00000624556 255 ntBASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00588Q9Y4M8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 AC007322.1-201ENST00000426983 750 ntBASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 AC010536.3-201ENST00000620306 533 ntBASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 AC026471.6-201ENST00000622954 1905 ntBASIC14.53□□□□□ -0.08
LINC00588Q9Y4M8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00588Q9Y4M8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00588Q9Y4M8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00588Q9Y4M8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00588Q9Y4M8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00588Q9Y4M8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00588Q9Y4M8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00588Q9Y4M8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00588Q9Y4M8 SLC7A5P1-201ENST00000568957 537 ntBASIC14.52□□□□□ -0.09
LINC00588Q9Y4M8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00588Q9Y4M8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms