Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF11Q9Y3C5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 AC104564.3-201ENST00000582367 638 ntBASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 SMUG1P1-201ENST00000590640 811 ntBASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF11Q9Y3C5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF11Q9Y3C5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF11Q9Y3C5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF11Q9Y3C5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.64■□□□□ 0.9
RNF11Q9Y3C5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 AC106739.1-201ENST00000617035 715 ntBASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 PKD1P6-201ENST00000343738 4769 ntBASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF11Q9Y3C5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 AC099791.1-201ENST00000416440 715 ntBASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 AC110285.6-201ENST00000617652 491 ntBASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 AC003102.1-202ENST00000563394 1796 ntBASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF11Q9Y3C5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 IGHV3-19-201ENST00000521488 291 ntBASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF11Q9Y3C5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF11Q9Y3C5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF11Q9Y3C5 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF11Q9Y3C5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF11Q9Y3C5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF11Q9Y3C5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF11Q9Y3C5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF11Q9Y3C5 AF106564.1-201ENST00000607058 2553 ntBASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF11Q9Y3C5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms