Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PDZRN3Q9UPQ7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.39■■□□□ 1.98
PDZRN3Q9UPQ7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PDZRN3Q9UPQ7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
PDZRN3Q9UPQ7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PDZRN3Q9UPQ7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
PDZRN3Q9UPQ7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PDZRN3Q9UPQ7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 AC004687.1-201ENST00000579003 1625 ntBASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PDZRN3Q9UPQ7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.37■■□□□ 1.97
PDZRN3Q9UPQ7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.37■■□□□ 1.97
PDZRN3Q9UPQ7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.37■■□□□ 1.97
PDZRN3Q9UPQ7 AC231657.2-201ENST00000624556 255 ntBASIC27.37■■□□□ 1.97
PDZRN3Q9UPQ7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PDZRN3Q9UPQ7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
PDZRN3Q9UPQ7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.36■■□□□ 1.97
PDZRN3Q9UPQ7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PDZRN3Q9UPQ7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PDZRN3Q9UPQ7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PDZRN3Q9UPQ7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
PDZRN3Q9UPQ7 MFSD11-216ENST00000590393 1141 ntBASIC27.35■■□□□ 1.97
PDZRN3Q9UPQ7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.35■■□□□ 1.97
PDZRN3Q9UPQ7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.34■■□□□ 1.97
PDZRN3Q9UPQ7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDZRN3Q9UPQ7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.33■■□□□ 1.97
PDZRN3Q9UPQ7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
PDZRN3Q9UPQ7 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.33■■□□□ 1.97
PDZRN3Q9UPQ7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.33■■□□□ 1.97
PDZRN3Q9UPQ7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDZRN3Q9UPQ7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
PDZRN3Q9UPQ7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.32■■□□□ 1.96
PDZRN3Q9UPQ7 TSPY6P-201ENST00000448518 926 ntBASIC27.32■■□□□ 1.96
PDZRN3Q9UPQ7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.32■■□□□ 1.96
PDZRN3Q9UPQ7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.32■■□□□ 1.96
PDZRN3Q9UPQ7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDZRN3Q9UPQ7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
PDZRN3Q9UPQ7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDZRN3Q9UPQ7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 AC083906.2-201ENST00000511578 360 ntBASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 AC066615.1-201ENST00000640911 628 ntBASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDZRN3Q9UPQ7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
PDZRN3Q9UPQ7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PDZRN3Q9UPQ7 KRT18P6-201ENST00000555540 1265 ntBASIC27.3■■□□□ 1.96
PDZRN3Q9UPQ7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PDZRN3Q9UPQ7 OXCT2P1-201ENST00000447263 1535 ntBASIC27.3■■□□□ 1.96
PDZRN3Q9UPQ7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
PDZRN3Q9UPQ7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 FBXW4P1-201ENST00000426721 2239 ntBASIC27.29■■□□□ 1.96
PDZRN3Q9UPQ7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms