Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
LRFN1Q9P244 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN1Q9P244 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRFN1Q9P244 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.46■□□□□ 0.71
LRFN1Q9P244 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.46■□□□□ 0.71
LRFN1Q9P244 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.46■□□□□ 0.71
LRFN1Q9P244 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.46■□□□□ 0.71
LRFN1Q9P244 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.46■□□□□ 0.71
LRFN1Q9P244 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.46■□□□□ 0.71
LRFN1Q9P244 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 AC092053.2-201ENST00000640557 1818 ntBASIC19.46■□□□□ 0.71
LRFN1Q9P244 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN1Q9P244 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 AC127496.7-201ENST00000625110 1798 ntBASIC19.45■□□□□ 0.7
LRFN1Q9P244 NCF1B-203ENST00000435988 1254 ntBASIC19.45■□□□□ 0.7
LRFN1Q9P244 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 AC008175.2-201ENST00000612840 297 ntBASIC19.45■□□□□ 0.7
LRFN1Q9P244 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN1Q9P244 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN1Q9P244 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.45■□□□□ 0.7
LRFN1Q9P244 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN1Q9P244 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 AC080038.3-201ENST00000623346 1952 ntBASIC19.44■□□□□ 0.7
LRFN1Q9P244 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.44■□□□□ 0.7
LRFN1Q9P244 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.44■□□□□ 0.7
LRFN1Q9P244 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.44■□□□□ 0.7
LRFN1Q9P244 AC104771.1-201ENST00000603335 964 ntBASIC19.44■□□□□ 0.7
LRFN1Q9P244 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.44■□□□□ 0.7
LRFN1Q9P244 AL109923.1-201ENST00000618799 583 ntBASIC19.44■□□□□ 0.7
LRFN1Q9P244 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 AC010536.3-201ENST00000620306 533 ntBASIC19.44■□□□□ 0.7
LRFN1Q9P244 AC120498.10-201ENST00000621827 505 ntBASIC19.44■□□□□ 0.7
LRFN1Q9P244 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN1Q9P244 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 GPX1P1-201ENST00000388829 606 ntBASIC19.43■□□□□ 0.7
LRFN1Q9P244 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 SLC7A5P2-201ENST00000553010 536 ntBASIC19.43■□□□□ 0.7
LRFN1Q9P244 SLC7A5P1-201ENST00000568957 537 ntBASIC19.43■□□□□ 0.7
LRFN1Q9P244 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 AC005181.1-201ENST00000604782 1256 ntBASIC19.43■□□□□ 0.7
LRFN1Q9P244 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LRFN1Q9P244 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN1Q9P244 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN1Q9P244 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRFN1Q9P244 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN1Q9P244 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN1Q9P244 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.42■□□□□ 0.7
LRFN1Q9P244 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms