Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC30.73■■■□□ 2.51
SLC52A1Q9NWF4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SLC52A1Q9NWF4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC52A1Q9NWF4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC30.72■■■□□ 2.51
SLC52A1Q9NWF4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SLC52A1Q9NWF4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.72■■■□□ 2.51
SLC52A1Q9NWF4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.72■■■□□ 2.51
SLC52A1Q9NWF4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SLC52A1Q9NWF4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SLC52A1Q9NWF4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
SLC52A1Q9NWF4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 UNC93B5-201ENST00000530315 699 ntBASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC30.71■■■□□ 2.51
SLC52A1Q9NWF4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.7■■■□□ 2.51
SLC52A1Q9NWF4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC30.7■■■□□ 2.5
SLC52A1Q9NWF4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SLC52A1Q9NWF4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SLC52A1Q9NWF4 AC026366.1-201ENST00000488803 879 ntBASIC30.69■■■□□ 2.5
SLC52A1Q9NWF4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC30.69■■■□□ 2.5
SLC52A1Q9NWF4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
SLC52A1Q9NWF4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC30.68■■■□□ 2.5
SLC52A1Q9NWF4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC30.68■■■□□ 2.5
SLC52A1Q9NWF4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.68■■■□□ 2.5
SLC52A1Q9NWF4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC30.68■■■□□ 2.5
SLC52A1Q9NWF4 AC142381.4-202ENST00000563973 229 ntBASIC30.68■■■□□ 2.5
SLC52A1Q9NWF4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SLC52A1Q9NWF4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SLC52A1Q9NWF4 AC087742.1-201ENST00000575880 1738 ntBASIC30.67■■■□□ 2.5
SLC52A1Q9NWF4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
SLC52A1Q9NWF4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC30.67■■■□□ 2.5
SLC52A1Q9NWF4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SLC52A1Q9NWF4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SLC52A1Q9NWF4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
SLC52A1Q9NWF4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SLC52A1Q9NWF4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC30.66■■■□□ 2.5
SLC52A1Q9NWF4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SLC52A1Q9NWF4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SLC52A1Q9NWF4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SLC52A1Q9NWF4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC30.64■■■□□ 2.5
SLC52A1Q9NWF4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SLC52A1Q9NWF4 AL596275.1-201ENST00000423464 877 ntBASIC30.64■■■□□ 2.5
SLC52A1Q9NWF4 AL158047.1-201ENST00000445918 881 ntBASIC30.64■■■□□ 2.5
SLC52A1Q9NWF4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SLC52A1Q9NWF4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
SLC52A1Q9NWF4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 AC061975.6-201ENST00000579045 1553 ntBASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SLC52A1Q9NWF4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms