Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 AL031432.3-201ENST00000607698 485 ntBASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTPS2Q9NRF8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 OXCT2P1-201ENST00000447263 1535 ntBASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 AC027682.1-201ENST00000562846 899 ntBASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 AF213884.3-201ENST00000563833 479 ntBASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 AL024507.2-201ENST00000606070 2574 ntBASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTPS2Q9NRF8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 AC133561.4-201ENST00000566112 224 ntBASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTPS2Q9NRF8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 MIR939-201ENST00000401314 82 ntBASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CTPS2Q9NRF8 FEM1AP4-201ENST00000443167 1987 ntBASIC19.64■□□□□ 0.74
CTPS2Q9NRF8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CTPS2Q9NRF8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 AL136967.2-201ENST00000623968 743 ntBASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTPS2Q9NRF8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 RASA4CP-201ENST00000424092 1398 ntBASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.62■□□□□ 0.73
CTPS2Q9NRF8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms