Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 KRT18P61-201ENST00000585825 1298 ntBASIC19.88■□□□□ 0.77
KLHL1Q9NR64 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL1Q9NR64 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 AC004854.2-201ENST00000608450 1441 ntBASIC19.86■□□□□ 0.77
KLHL1Q9NR64 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 AC016769.1-201ENST00000409132 1010 ntBASIC19.86■□□□□ 0.77
KLHL1Q9NR64 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 AC137761.2-201ENST00000561729 223 ntBASIC19.86■□□□□ 0.77
KLHL1Q9NR64 AC145350.3-201ENST00000569033 163 ntBASIC19.86■□□□□ 0.77
KLHL1Q9NR64 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KLHL1Q9NR64 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 AC137767.1-201ENST00000602918 1920 ntBASIC19.85■□□□□ 0.77
KLHL1Q9NR64 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KLHL1Q9NR64 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 LINC01960-201ENST00000563759 1884 ntBASIC19.84■□□□□ 0.77
KLHL1Q9NR64 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 AC087742.1-201ENST00000575880 1738 ntBASIC19.84■□□□□ 0.77
KLHL1Q9NR64 AP004607.4-201ENST00000530158 1459 ntBASIC19.84■□□□□ 0.77
KLHL1Q9NR64 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms