Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HPS4Q9NQG7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
HPS4Q9NQG7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 TSPY20P-201ENST00000450910 630 ntBASIC21.93■■□□□ 1.1
HPS4Q9NQG7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 AC087742.1-201ENST00000575880 1738 ntBASIC21.93■■□□□ 1.1
HPS4Q9NQG7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 AC137767.1-201ENST00000602918 1920 ntBASIC21.93■■□□□ 1.1
HPS4Q9NQG7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 TMEM191A-211ENST00000637163 1067 ntBASIC21.93■■□□□ 1.1
HPS4Q9NQG7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HPS4Q9NQG7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 TERF1P5-201ENST00000477545 1207 ntBASIC21.92■■□□□ 1.1
HPS4Q9NQG7 AC098934.4-201ENST00000564127 592 ntBASIC21.92■■□□□ 1.1
HPS4Q9NQG7 AC013268.1-206ENST00000638368 961 ntBASIC21.92■■□□□ 1.1
HPS4Q9NQG7 AC112229.1-201ENST00000639295 961 ntBASIC21.92■■□□□ 1.1
HPS4Q9NQG7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HPS4Q9NQG7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 AC069152.1-201ENST00000438030 544 ntBASIC21.91■■□□□ 1.1
HPS4Q9NQG7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HPS4Q9NQG7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 AC068338.2-201ENST00000563278 1430 ntBASIC21.9■■□□□ 1.1
HPS4Q9NQG7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HPS4Q9NQG7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.89■■□□□ 1.1
HPS4Q9NQG7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.89■■□□□ 1.1
HPS4Q9NQG7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 CLDN5-201ENST00000403084 2357 ntBASIC21.89■■□□□ 1.09
HPS4Q9NQG7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HPS4Q9NQG7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 C9orf163-202ENST00000624034 2573 ntBASIC21.88■■□□□ 1.09
HPS4Q9NQG7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 CYP2T1P-201ENST00000432607 1285 ntBASIC21.88■■□□□ 1.09
HPS4Q9NQG7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS4Q9NQG7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms