Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLK4Q9HAZ1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 AC080038.3-201ENST00000623346 1952 ntBASIC20.54■□□□□ 0.88
CLK4Q9HAZ1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 ZNRF2P3-201ENST00000424200 374 ntBASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 FAM99A-202ENST00000538190 1989 ntBASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 AC005229.4-201ENST00000610085 2198 ntBASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CLK4Q9HAZ1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 AC012414.1-201ENST00000556676 535 ntBASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 AC105233.4-201ENST00000642045 216 ntBASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLK4Q9HAZ1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLK4Q9HAZ1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLK4Q9HAZ1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLK4Q9HAZ1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.52■□□□□ 0.87
CLK4Q9HAZ1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLK4Q9HAZ1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLK4Q9HAZ1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLK4Q9HAZ1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLK4Q9HAZ1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 SMUG1P1-201ENST00000590640 811 ntBASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLK4Q9HAZ1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms