Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
SCAF1Q9H7N4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SCAF1Q9H7N4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SCAF1Q9H7N4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC31.38■■■□□ 2.61
SCAF1Q9H7N4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SCAF1Q9H7N4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
SCAF1Q9H7N4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SCAF1Q9H7N4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 MIR1224-201ENST00000408193 85 ntBASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
SCAF1Q9H7N4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF1Q9H7N4 AC133637.1-201ENST00000624115 1537 ntBASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 RNA5SP413-201ENST00000516373 109 ntBASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 AC133041.1-202ENST00000642053 222 ntBASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF1Q9H7N4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SCAF1Q9H7N4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.33■■■□□ 2.61
SCAF1Q9H7N4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 AC098934.4-201ENST00000564127 592 ntBASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 AC007952.6-201ENST00000573168 2673 ntBASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 AC003957.1-201ENST00000625108 2673 ntBASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF1Q9H7N4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC31.31■■■□□ 2.6
SCAF1Q9H7N4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.31■■■□□ 2.6
SCAF1Q9H7N4 MFSD11-216ENST00000590393 1141 ntBASIC31.31■■■□□ 2.6
SCAF1Q9H7N4 AC005181.1-201ENST00000604782 1256 ntBASIC31.31■■■□□ 2.6
SCAF1Q9H7N4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.31■■■□□ 2.6
SCAF1Q9H7N4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.31■■■□□ 2.6
SCAF1Q9H7N4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 AC098590.1-201ENST00000468126 897 ntBASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms