Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 MFSD11-216ENST00000590393 1141 ntBASIC23.23■■□□□ 1.31
RNF39Q9H2S5 AC034229.4-201ENST00000607861 441 ntBASIC23.23■■□□□ 1.31
RNF39Q9H2S5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
RNF39Q9H2S5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 KRT18P11-201ENST00000435214 1283 ntBASIC23.22■■□□□ 1.31
RNF39Q9H2S5 AC026185.1-201ENST00000445748 174 ntBASIC23.22■■□□□ 1.31
RNF39Q9H2S5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 UBE2DNL-204ENST00000602536 740 ntBASIC23.22■■□□□ 1.31
RNF39Q9H2S5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.22■■□□□ 1.31
RNF39Q9H2S5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 CROCCP5-201ENST00000436658 830 ntBASIC23.21■■□□□ 1.31
RNF39Q9H2S5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 AL034346.1-201ENST00000568244 1277 ntBASIC23.21■■□□□ 1.31
RNF39Q9H2S5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.21■■□□□ 1.31
RNF39Q9H2S5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF39Q9H2S5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF39Q9H2S5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF39Q9H2S5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF39Q9H2S5 HLA-L-209ENST00000420110 1011 ntBASIC23.2■■□□□ 1.3
RNF39Q9H2S5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.2■■□□□ 1.3
RNF39Q9H2S5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.2■■□□□ 1.3
RNF39Q9H2S5 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC23.2■■□□□ 1.3
RNF39Q9H2S5 AC021321.1-201ENST00000607397 1113 ntBASIC23.2■■□□□ 1.3
RNF39Q9H2S5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF39Q9H2S5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF39Q9H2S5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 MTND2P9-201ENST00000422293 931 ntBASIC23.18■■□□□ 1.3
RNF39Q9H2S5 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.18■■□□□ 1.3
RNF39Q9H2S5 AL353718.1-201ENST00000451028 517 ntBASIC23.18■■□□□ 1.3
RNF39Q9H2S5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.18■■□□□ 1.3
RNF39Q9H2S5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 AC027348.2-201ENST00000624375 642 ntBASIC23.18■■□□□ 1.3
RNF39Q9H2S5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.18■■□□□ 1.3
RNF39Q9H2S5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms