Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
CDH23Q9H251 RPPH1-201ENST00000516869 333 ntBASIC22.82■■□□□ 1.24
CDH23Q9H251 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.82■■□□□ 1.24
CDH23Q9H251 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH23Q9H251 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH23Q9H251 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.82■■□□□ 1.24
CDH23Q9H251 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH23Q9H251 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.81■■□□□ 1.24
CDH23Q9H251 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDH23Q9H251 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.81■■□□□ 1.24
CDH23Q9H251 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH23Q9H251 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH23Q9H251 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH23Q9H251 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH23Q9H251 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH23Q9H251 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.81■■□□□ 1.24
CDH23Q9H251 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.81■■□□□ 1.24
CDH23Q9H251 KRT18P35-201ENST00000510488 1269 ntBASIC22.81■■□□□ 1.24
CDH23Q9H251 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDH23Q9H251 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.81■■□□□ 1.24
CDH23Q9H251 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CDH23Q9H251 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
CDH23Q9H251 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.8■■□□□ 1.24
CDH23Q9H251 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDH23Q9H251 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDH23Q9H251 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDH23Q9H251 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.8■■□□□ 1.24
CDH23Q9H251 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.8■■□□□ 1.24
CDH23Q9H251 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.8■■□□□ 1.24
CDH23Q9H251 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDH23Q9H251 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.79■■□□□ 1.24
CDH23Q9H251 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.79■■□□□ 1.24
CDH23Q9H251 KRT17P1-201ENST00000399211 1546 ntBASIC22.79■■□□□ 1.24
CDH23Q9H251 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.79■■□□□ 1.24
CDH23Q9H251 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.79■■□□□ 1.24
CDH23Q9H251 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.79■■□□□ 1.24
CDH23Q9H251 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDH23Q9H251 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDH23Q9H251 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDH23Q9H251 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDH23Q9H251 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.79■■□□□ 1.24
CDH23Q9H251 CYP2T3P-201ENST00000601990 817 ntBASIC22.79■■□□□ 1.24
CDH23Q9H251 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDH23Q9H251 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDH23Q9H251 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.78■■□□□ 1.24
CDH23Q9H251 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.78■■□□□ 1.24
CDH23Q9H251 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.78■■□□□ 1.24
CDH23Q9H251 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.78■■□□□ 1.24
CDH23Q9H251 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.78■■□□□ 1.24
CDH23Q9H251 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDH23Q9H251 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.78■■□□□ 1.24
CDH23Q9H251 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CDH23Q9H251 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDH23Q9H251 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.77■■□□□ 1.24
CDH23Q9H251 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.77■■□□□ 1.24
CDH23Q9H251 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.77■■□□□ 1.24
CDH23Q9H251 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.77■■□□□ 1.24
CDH23Q9H251 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CDH23Q9H251 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.77■■□□□ 1.24
CDH23Q9H251 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDH23Q9H251 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.77■■□□□ 1.24
CDH23Q9H251 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.77■■□□□ 1.24
CDH23Q9H251 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CDH23Q9H251 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.77■■□□□ 1.24
CDH23Q9H251 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.77■■□□□ 1.24
CDH23Q9H251 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDH23Q9H251 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.77■■□□□ 1.24
CDH23Q9H251 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDH23Q9H251 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.76■■□□□ 1.23
CDH23Q9H251 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDH23Q9H251 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.76■■□□□ 1.23
CDH23Q9H251 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.76■■□□□ 1.23
CDH23Q9H251 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDH23Q9H251 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.76■■□□□ 1.23
CDH23Q9H251 EEF1DP3-203ENST00000566025 782 ntBASIC22.76■■□□□ 1.23
CDH23Q9H251 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CDH23Q9H251 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.76■■□□□ 1.23
CDH23Q9H251 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDH23Q9H251 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.76■■□□□ 1.23
CDH23Q9H251 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CDH23Q9H251 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.76■■□□□ 1.23
CDH23Q9H251 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.76■■□□□ 1.23
CDH23Q9H251 AP006587.3-201ENST00000525742 1516 ntBASIC22.76■■□□□ 1.23
CDH23Q9H251 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.76■■□□□ 1.23
CDH23Q9H251 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.75■■□□□ 1.23
CDH23Q9H251 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.75■■□□□ 1.23
CDH23Q9H251 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDH23Q9H251 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms