Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD1Q96S90 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 AP001160.3-201ENST00000601484 763 ntBASIC21.16■□□□□ 0.98
LYSMD1Q96S90 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD1Q96S90 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 KRT18P20-201ENST00000548986 1279 ntBASIC21.15■□□□□ 0.98
LYSMD1Q96S90 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 AC244015.2-201ENST00000616358 1861 ntBASIC21.15■□□□□ 0.98
LYSMD1Q96S90 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD1Q96S90 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.14■□□□□ 0.98
LYSMD1Q96S90 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LYSMD1Q96S90 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LYSMD1Q96S90 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LYSMD1Q96S90 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD1Q96S90 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD1Q96S90 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.14■□□□□ 0.97
LYSMD1Q96S90 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.14■□□□□ 0.97
LYSMD1Q96S90 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
LYSMD1Q96S90 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.13■□□□□ 0.97
LYSMD1Q96S90 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 AC022517.1-201ENST00000592429 346 ntBASIC21.13■□□□□ 0.97
LYSMD1Q96S90 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.13■□□□□ 0.97
LYSMD1Q96S90 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.12■□□□□ 0.97
LYSMD1Q96S90 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD1Q96S90 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD1Q96S90 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD1Q96S90 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD1Q96S90 POU5F1P4-201ENST00000413175 1085 ntBASIC21.12■□□□□ 0.97
LYSMD1Q96S90 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.12■□□□□ 0.97
LYSMD1Q96S90 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD1Q96S90 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms