Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.99■□□□□ 0.79
COL21A1Q96P44 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL21A1Q96P44 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 AC019069.1-201ENST00000610008 1333 ntBASIC19.99■□□□□ 0.79
COL21A1Q96P44 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
COL21A1Q96P44 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL21A1Q96P44 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.98■□□□□ 0.79
COL21A1Q96P44 MIR572-201ENST00000384983 95 ntBASIC19.98■□□□□ 0.79
COL21A1Q96P44 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.98■□□□□ 0.79
COL21A1Q96P44 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.98■□□□□ 0.79
COL21A1Q96P44 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.98■□□□□ 0.79
COL21A1Q96P44 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.98■□□□□ 0.79
COL21A1Q96P44 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.98■□□□□ 0.79
COL21A1Q96P44 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL21A1Q96P44 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL21A1Q96P44 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL21A1Q96P44 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL21A1Q96P44 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
COL21A1Q96P44 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.97■□□□□ 0.79
COL21A1Q96P44 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL21A1Q96P44 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL21A1Q96P44 IRS3P-201ENST00000223076 1006 ntBASIC19.97■□□□□ 0.79
COL21A1Q96P44 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL21A1Q96P44 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.97■□□□□ 0.79
COL21A1Q96P44 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.97■□□□□ 0.79
COL21A1Q96P44 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL21A1Q96P44 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL21A1Q96P44 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.97■□□□□ 0.79
COL21A1Q96P44 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.97■□□□□ 0.79
COL21A1Q96P44 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL21A1Q96P44 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL21A1Q96P44 AC026471.6-201ENST00000622954 1905 ntBASIC19.96■□□□□ 0.79
COL21A1Q96P44 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL21A1Q96P44 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.96■□□□□ 0.79
COL21A1Q96P44 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.96■□□□□ 0.79
COL21A1Q96P44 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL21A1Q96P44 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL21A1Q96P44 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL21A1Q96P44 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL21A1Q96P44 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.95■□□□□ 0.78
COL21A1Q96P44 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL21A1Q96P44 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL21A1Q96P44 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL21A1Q96P44 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.95■□□□□ 0.78
COL21A1Q96P44 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL21A1Q96P44 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.95■□□□□ 0.78
COL21A1Q96P44 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL21A1Q96P44 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL21A1Q96P44 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL21A1Q96P44 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL21A1Q96P44 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.95■□□□□ 0.78
COL21A1Q96P44 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.95■□□□□ 0.78
COL21A1Q96P44 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL21A1Q96P44 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL21A1Q96P44 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL21A1Q96P44 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.94■□□□□ 0.78
COL21A1Q96P44 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.94■□□□□ 0.78
COL21A1Q96P44 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.94■□□□□ 0.78
COL21A1Q96P44 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL21A1Q96P44 ZNRF2P3-201ENST00000424200 374 ntBASIC19.94■□□□□ 0.78
COL21A1Q96P44 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.94■□□□□ 0.78
COL21A1Q96P44 AC105233.4-201ENST00000642045 216 ntBASIC19.94■□□□□ 0.78
COL21A1Q96P44 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL21A1Q96P44 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL21A1Q96P44 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL21A1Q96P44 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COL21A1Q96P44 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL21A1Q96P44 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL21A1Q96P44 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL21A1Q96P44 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL21A1Q96P44 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL21A1Q96P44 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL21A1Q96P44 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 Z98882.1-201ENST00000622160 2253 ntBASIC19.93■□□□□ 0.78
COL21A1Q96P44 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.93■□□□□ 0.78
COL21A1Q96P44 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL21A1Q96P44 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL21A1Q96P44 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL21A1Q96P44 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms