Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CASKIN1Q8WXD9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC33.29■■■□□ 2.92
CASKIN1Q8WXD9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 AC120498.10-201ENST00000621827 505 ntBASIC33.28■■■□□ 2.92
CASKIN1Q8WXD9 MKRN4P-201ENST00000444706 1521 ntBASIC33.27■■■□□ 2.92
CASKIN1Q8WXD9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
CASKIN1Q8WXD9 MIPEPP3-201ENST00000412105 444 ntBASIC33.27■■■□□ 2.92
CASKIN1Q8WXD9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC33.27■■■□□ 2.92
CASKIN1Q8WXD9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
CASKIN1Q8WXD9 AC092118.2-201ENST00000613495 667 ntBASIC33.27■■■□□ 2.92
CASKIN1Q8WXD9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CASKIN1Q8WXD9 AC080038.3-201ENST00000623346 1952 ntBASIC33.26■■■□□ 2.92
CASKIN1Q8WXD9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC33.26■■■□□ 2.92
CASKIN1Q8WXD9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC33.26■■■□□ 2.92
CASKIN1Q8WXD9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC33.26■■■□□ 2.92
CASKIN1Q8WXD9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC33.26■■■□□ 2.92
CASKIN1Q8WXD9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 AL512625.2-201ENST00000417533 625 ntBASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC33.26■■■□□ 2.91
CASKIN1Q8WXD9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CASKIN1Q8WXD9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CASKIN1Q8WXD9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC33.25■■■□□ 2.91
CASKIN1Q8WXD9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CASKIN1Q8WXD9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CASKIN1Q8WXD9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC33.25■■■□□ 2.91
CASKIN1Q8WXD9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CASKIN1Q8WXD9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
CASKIN1Q8WXD9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 AC092053.2-201ENST00000640557 1818 ntBASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 TSPY20P-201ENST00000450910 630 ntBASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CASKIN1Q8WXD9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC33.23■■■□□ 2.91
CASKIN1Q8WXD9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 PPP1R14BP2-201ENST00000426284 444 ntBASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 AC069236.1-201ENST00000604339 616 ntBASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC33.22■■■□□ 2.91
CASKIN1Q8WXD9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CASKIN1Q8WXD9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC33.21■■■□□ 2.91
CASKIN1Q8WXD9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
CASKIN1Q8WXD9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC33.21■■■□□ 2.91
CASKIN1Q8WXD9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
CASKIN1Q8WXD9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 MYC-209ENST00000641252 345 ntBASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CASKIN1Q8WXD9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC33.2■■■□□ 2.9
CASKIN1Q8WXD9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 MIR4758-201ENST00000577688 71 ntBASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 AC026471.6-201ENST00000622954 1905 ntBASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
CASKIN1Q8WXD9 AC083880.1-201ENST00000608266 535 ntBASIC33.19■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms