Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 AC092666.2-201ENST00000613287 246 ntBASIC21.47■■□□□ 1.03
PTCD2Q8WV60 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTCD2Q8WV60 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 AC123595.1-201ENST00000440769 1046 ntBASIC21.46■■□□□ 1.03
PTCD2Q8WV60 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTCD2Q8WV60 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PTCD2Q8WV60 AP006587.3-201ENST00000525742 1516 ntBASIC21.45■■□□□ 1.02
PTCD2Q8WV60 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.45■■□□□ 1.02
PTCD2Q8WV60 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTCD2Q8WV60 AC003102.1-202ENST00000563394 1796 ntBASIC21.43■■□□□ 1.02
PTCD2Q8WV60 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 KRT18P5-201ENST00000436075 1291 ntBASIC21.43■■□□□ 1.02
PTCD2Q8WV60 AC034268.1-201ENST00000441047 882 ntBASIC21.43■■□□□ 1.02
PTCD2Q8WV60 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 TERF1P2-201ENST00000583350 1212 ntBASIC21.43■■□□□ 1.02
PTCD2Q8WV60 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 TPRG1LP1-201ENST00000598702 760 ntBASIC21.43■■□□□ 1.02
PTCD2Q8WV60 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTCD2Q8WV60 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 AL024507.2-201ENST00000606070 2574 ntBASIC21.42■■□□□ 1.02
PTCD2Q8WV60 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.42■■□□□ 1.02
PTCD2Q8WV60 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 KRT18P14-201ENST00000534205 1250 ntBASIC21.41■■□□□ 1.02
PTCD2Q8WV60 KRT18P61-201ENST00000585825 1298 ntBASIC21.41■■□□□ 1.02
PTCD2Q8WV60 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTCD2Q8WV60 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 LINC02228-203ENST00000641970 1355 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms