Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r228Q8R2A7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vmn1r228Q8R2A7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Gm9870-201ENSMUST00000063874 645 ntBASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vmn1r228Q8R2A7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Vmn1r228Q8R2A7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vmn1r228Q8R2A7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vmn1r228Q8R2A7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vmn1r228Q8R2A7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vmn1r228Q8R2A7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Vmn1r228Q8R2A7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vmn1r228Q8R2A7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vmn1r228Q8R2A7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Gm40881-201ENSMUST00000223397 166 ntBASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vmn1r228Q8R2A7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Gm10232-201ENSMUST00000089221 720 ntBASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vmn1r228Q8R2A7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms