Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 SERBP1P1-201ENST00000396021 1160 ntBASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM116Q8NCL8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 AP005435.1-201ENST00000529293 1178 ntBASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 AC010525.1-201ENST00000585559 441 ntBASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM116Q8NCL8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 AC011298.3-201ENST00000615796 283 ntBASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM116Q8NCL8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 AC136469.2-201ENST00000623944 1028 ntBASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM116Q8NCL8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM116Q8NCL8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 UNC93B3-201ENST00000308076 687 ntBASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms